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. 2019 Jul 30;93(16):e00211-19. doi: 10.1128/JVI.00211-19

TABLE 1.

Analysis of the CRISPR screena

Gene IDb Gene rank by algorithm
MAGeCK1 MAGeCK2 RIGER 1 RIGER 2
IFI6 1 1 1 1
ISG20 2 2 2 26
ZCCHC6 3 236 3 85
IFN-λ2 4 3 9 64
HELZ2 5 6 3 85
IFN-λR1 6 4 6 40
EGFR 7 18,134 10,142 17,934
IRF1 8 7 140 76
MAVS 9 127 847 19,704
TRIM25 10 89 228 788
MFSD2A 14 3,966 149 10,188
PITPNB 24 927 647 16,783
a

A comparison of the 2 screen repeats and two different analysis algorithms used RIGER and MAGeCK. Values represent gene ranks assigned by the corresponding algorithm in the different repeats. Highest-ranking genes are sorted relative to the results of MAGeCK applied on the first screen. The gene ranks of the first six candidates are robust across the replicates and the algorithm used.

b

ID, identifier.