TABLE 1.

Identities of nucleotide and amino acid sequences of SINV-I strains within different clades

Identity categorya	% identity
	CDS	nsP1	nsP2	nsP3	nsP4	CP	E3	E2	6K	E1
Total (nt)	87.9–100	91.8–100	85.8–100	84.4–100	88–100	88.7–100	86.6–100	87.6–99.9	88.1–100	89.1–100
Total (aa)	96.3–100	97.1–100	96.9–100	91.1–100	97.5–100	92.2–100	94.5–100	95.3–100	94.2–100	96.2–100
Within clade A (nt)	99.1–100	99.2–100	98.9–100	99–100	98.9–100	96.8–100	98.8–100	99–99.9	97.5–100	99–100
Within clade A (aa)	99.1–100	98.9–100	99.3–100	89.3–100	99.3–100	94.4–100	98.2–100	99–100	96.2–98.1	99.3–100
Within clade B (nt)	99.1–99.9	99.1–99.8	99.1–99.9	99.3–99.9	99.1–100	98.8–100	99.4–100	99–99.8	98.8–100	99.1–99.9
Within clade B (aa)	99.7–100	99.3–99.8	99.8–100	99.6–100	99.7–100	99.2–100	100	99.8–100	100	99.1–100
Within clade C (nt)	98.3–99.8	98.6–99.9	98.1–99.6	97.6–99.6	98.7–99.7	98.7–100	97.6–100	98.3–99.8	95.4–100	98.4–100
Within clade C (aa)	98.9–99.6	98.5–100	98.5–99.6	97.6–99.5	98.9–100	99.2–100	96.4–100	98.8–100	96.2–100	98.6–100
Within clade D (nt)	87.9–100	96.1–100	94.3–100	95.7–100	96.1–100	95.7–100	97–100	94.9–100	93.2–100	97–100
Within clade D (aa)	96.3–100	97.9–100	97.7–100	96.6–100	98–100	97.7–100	100	97.3–100	98.1–100	98.6–100
Within clade E (nt)	99.2–99.6	99.4–99.7	98.9–99.8	98.5–99.3	99.3–99.4	99.1–99.7	98.8–99.4	99.3–99.8	93.1–98.8	99.3–100
Within clade E (aa)	99.6–99.9	99.8–100	99.8–100	99–99.6	99.8–100	99.2–100	100	99.8–100	94.2–98.1	94.8–100

^ant, nucleotides; aa, amino acids.