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. 2019 Aug 1;8(31):e00244-19. doi: 10.1128/MRA.00244-19

FIG 1.

FIG 1

16S rRNA gene phylogeny of Rummeliibacillus sp. strain TYF005. The 16S rRNA gene sequences of related taxa were obtained from GenBank, and multiple alignments were performed with the CLUSTAL W program (22). Phylogenetic analysis based on the 16S rRNA sequence was conducted using the maximum likelihood method based on the Kimura 2-parameter model (23) in MEGA7 (24) with 1,000 replications in a bootstrap test. The initial tree for the heuristic search was obtained automatically by applying the neighbor-join and BioNJ algorithms to a matrix of pairwise distances estimated using the maximum composite likelihood (MCL) approach and then selecting the topology with the superior log likelihood value. Bootstrap values of >50% are shown. Bacillus amyloliquefaciens strain MML2715, which comes from the next closest genus, was used as an outgroup.