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. Author manuscript; available in PMC: 2020 May 7.
Published in final edited form as: Cell Metab. 2019 Feb 7;29(5):1119–1134.e12. doi: 10.1016/j.cmet.2019.01.005

Table 1.

Top 10 upregulated KEGG gene sets in GSK-3α KI (vs WT) mouse heart.

GS follow link to MSigDB SIZE ES NES NOM p-val FDR q-val
1 KEGG_COMPLEMENT_AND_COAGULATION_CASCADES 45 0.76 2.52 0 0
2 KEGG_PPAR_SIGNALING_PATHWAY 60 0.66 2.31 0 0.001
3 KEGG_GLYCINE_SERINE_AND THREONINE_METABOLISM 28 0.74 2.22 0.001 0.001
4 KEGG_CYSTEINE_AND_METHIONINE_METABOLISM 29 0.72 2.15 0 0.002
5 KEGG_SPLICEOSOME 90 0.48 1.77 0 0.131
6 KEGG_PHENYLALANINE_METABOLISM 16 0.65 1.75 0.019 0.135
7 KEGG_TRYPTOPHAN METABOLISM 33 0.56 1.74 0.006 0.131
8 KEGG_BASAL_TRANSCRIPTION_FACTORS 30 0.57 1.72 0.012 0.131
9 KEGG_PROTEASOME 42 0.53 1.72 0.011 0.123
10 KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM 42 0.54 1.71 0.001 0.115

The PPAR signaling pathway is most significantly enriched among energy metabolism-related gene sets in the hearts of GSK-3α knock-in (KI) mice compared to wild-type (WT) mice at three months of age, a time point before the development of cardiomyopathy in GSK-3α KI mice.