Table 2.
Previously sequenced strains.
| Strain | clade | Genome (Mb) | contigs | N50 (in kb) | CDSs* | Plasmid (kp) | TeNT | Origin, strain collection | Year | Geographical origin | Reference or accession |
|---|---|---|---|---|---|---|---|---|---|---|---|
| E88 | 1A | 2.873 | 2 | — | 2,824 | 74.0 (closed) | yes | Harvard derivative | 1920 | North America | 10 |
| CN655 | 1A | 2.850 | 118 | 110 | 2,819 | ca. 69.7 | yes | Harvard derivative | North America | 13 | |
| strain A | 1A | 2.824 | 93 | 114 | 2,781 | ca. 71.7 | yes | Harvard derivative | North America | 13 | |
| strain C2 | 1A | 2.829 | 39 | 263 | 2,799 | ca. 72.0 | yes | unknown | North America | 12 | |
| ATCC19406_FDA | 1A | 2.789 | 52 | 153 | 2,757 | No plasmid | no | unknown | North America | 12 | |
| ATCC19406_DOE | 1A | 2.789 | 34 | 146 | 2,757 | No plasmid | no | unknown | unknown | Unpublished; FUWT | |
| ATCC9441 | 1B | 2.800 | 28 | 1734 | 2,746 | 80.5 (single contig) | yes | unknown | North America | 12 | |
| ATCC454 | 1D | 2.853 | 67 | 87 | 2,805 | ca. 62.2 | no | feces | China | Unpublished; LBNB | |
| ATCC453 | 1D | 2.890 | 40 | 254 | 2,836 | ca. 90.9 | yes | feces | China | 12 | |
| Mfbjulcb2 | 1G | 2.811 | 1 | — | 2,743 | ? | yes | retail fish market | 2004 | India | Unpublished; CP027782.1 |
| 184.08 | 2 | 2.914 | 152 | 70 | 2,905 | ca. 73.0 | yes | Human (M 75 y), septic arthritis | 2008 | France | 13 |
| 12124569 | 2 | 2.866 | 3 | 2559 | 2,886 | 58.4 (closed) | yes | human (M 26 y), tibia fracture, no tetanus | 2012 | France | 49 |
*Predicted by RAST.