Figure 6.

Gene modules were identified by a color name (MEcolornumber) as assigned by the weighted gene co-expression network analysis (WGCNA) package. (A) Heatmap correlation of berries’ differential genes of each of 12 gene modules. (B) Heatmap plot of topological overlap in the gene network. In the heatmap, each row and column corresponds to a gene, a light color denotes low topological overlap, and progressively darker red denotes a higher topological overlap. Darker squares along the diagonal correspond to modules. The gene dendrogram and module assignment are shown along the left and top.