Table 1.
Details of lymphoma datasets
| GEO ID | Contributor | Title | Samples |
|---|---|---|---|
| Burkitt’s lymphoma | |||
| GSE4475 | Hummel M, 2006 | A Biologic Definition of Burkitt’s Lymphoma from Transcriptional and Genomic Profiling | 221 cases |
| GSE69053 | Sha C, 2015 | Transferring genomics to the clinic: distinguishing Burkitt and Diffuse large B-cell lymphoma | 131 cases |
| Diffuse large B-cell lymphoma | |||
| GSE31312 | Li Y, 2011 | Development and application of a new immunophenotypic algorithm for molecular subtype classification of Diffuse Large B-Cell Lymphoma (DLBCL): Report from an International DLBCL Rituximab-CHOP Consortium Program Study | 498 cases |
| GSE56315 | Bødker JS, 2014 | Diffuse Large B-Cell Lymphoma Classification System That Associates Normal B-Cell Subset Phenotypes With Prognosis | 89 cases 33 controls |
| GSE64555 | Linton K, 2014 | Microarray gene expression analysis of FFPE tissue permits molecular classification in diffuse large B-cell lymphoma | 40 cases |
| GSE69053 | Sha C, 2015 | Transferring genomics to the clinic: distinguishing Burkitt and Diffuse large B-cell lymphoma | 212 cases |
| GSE86613 | Bødker JS, 2016 | Expression data from diagnostic samples of diffuse large B-cell lymphomas (DLBCL), follicular lymphoma (FL) and primary and relapsed transformed FL | 41 cases |
| Mantle cell lymphoma | |||
| GSE21452 | Staudt LM, 2010 | Integrated genomic profiling in mantle cell lymphoma | 64 cases |
| GSE36000 | Jares P, 2012 | Mantle Cell Lymphoma | 38 cases |
| GSE70910 | Liu D, 2015 | Direct in vivo evidence for B-cell receptor and NF-KB activation in mantle cell lymphoma: role of the lymph node microenvironment and activating mutations | 55 cases |
| GSE93291 | Staudt LM, 2017 | A new molecular assay for the proliferation signature in mantle cell lymphoma applicable to formalin-fixed paraffin-embedded biopsies | 59 cases |