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. 2019 Jul 10;16(156):20190293. doi: 10.1098/rsif.2019.0293

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© 2019 The Authors.

Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.

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Figure 1. — Validating root-inference platform with synthetic Arabidopsis data. (a) Output from CRootBox simulation of Arabidopsis root growth; black scale bar is 1 cm. (b–d) Output posteriors from an ABC SMC framework run on CRootBox output, with final ABC SMC tolerance ε = 0.5 (Material and methods). (b) Posterior distribution on branching rate b in the growth model. (c) Two-dimensional posterior on primary root growth rate g and lateral root growth scaling α. (d) Posterior distribution on l_max, the maximum length parameter in the negative-exponential growth model used.