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. 2019 Jul 31;10:1691. doi: 10.3389/fmicb.2019.01691

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Copyright © 2019 Grillová, Oppelt, Mikalová, Nováková, Giacani, Niesnerová, Noda, Mechaly, Pospíšilová, Čejková, Grange, Dupin, Strnadel, Chen, Denham, Arora, Picardeau, Weston, Forsyth and Šmajs.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Inter-clade recombination events found among examined clinical samples. Coordinates according to the reference Nichols (CP04010.1) and reference SS14 (CP004011.2) for the Nichols-like and SS14-like clinical samples, respectively. Only positions with nucleotide differences are shown. The detailed description of the Figure 3 is given in the Supplementary Text S2.