Table 7.
Neutrality based on Fu (FS) and Tajima (D) tests and nucleotide diversity estimates (π) for the three multilocus sequence typing loci for populations of Aspergillus flavus collected from fields in the southeastern United States treated with Afla-Guard and AF36 biocontrol strains.
State | Sampling period | trpCa | mfsa,b | AF17a | ||||||
---|---|---|---|---|---|---|---|---|---|---|
FS | D | π | FS | D | π | FS | D | π | ||
Alabama | Pre-application | −1.0786 | −0.7180 | 0.0011 | −1.6917 | −0.7877 | 0.0058 | −0.4803 | −0.5979 | 0.0116 |
Post-application | −0.9824 | −0.6453 | 0.0011 | −2.0735 | −0.9052 | 0.0048 | 0.9633 | 0.9390 | 0.0114 | |
Harvest | −1.3830 | −0.7248 | 0.0017 | −3.6820 | −0.8408 | 0.0054 | 2.3024 | 1.0782 | 0.0099 | |
2012 | −1.1333 | −0.7239 | 0.0003 | −3.7406 | −0.9739 | 0.0042 | 0.2268 | 0.5271 | 0.0092 | |
2013 | −3.0801 | −1.0600 | 0.0020 | −3.3376 | −0.7285 | 0.0055 | 0.5519 | −0.7717 | 0.0085 | |
Georgia | Pre-application | −1.8387 | −0.8155 | 0.0017 | −1.6175 | −0.3810 | 0.0042 | −0.0881 | −0.3469 | 0.0050 |
Post-application | −1.6738 | −0.8295 | 0.0011 | −2.5014 | −0.7743 | 0.0041 | −0.3985 | −0.1441 | 0.0044 | |
Harvest | −1.9450 | −0.9182 | 0.0010 | −4.0554 | −1.1048 | 0.0036 | 0.1461 | 0.0804 | 0.0038 | |
2012 | −1.2246 | −0.6330 | 0.0013 | −2.3542 | −0.9817 | 0.0033 | −0.4891 | −0.4299 | 0.0052 | |
2013 | −1.1754 | −0.6162 | 0.0013 | −2.6525 | −0.6877 | 0.0046 | 0.1260 | 0.0405 | 0.0034 | |
North Carolina | Pre-application | 1.4768 | 0.6758 | 0.0046 | −0.4811 | −0.0224 | 0.0042 | 2.8917 | 1.7240 | 0.0100 |
Post-application | 1.5741 | 0.9971 | 0.0057 | 0.1346 | −1.0536 | 0.0017 | 1.4757 | 1.3664 | 0.0063 | |
Harvest | −0.9691 | −0.7874 | 0.0002 | −1.1847 | −1.5218* | 0.0005 | −1.1684 | −1.2295 | 0.0012 | |
2012 | 2.5226 | 1.4506 | 0.0060 | −2.0405 | −1.0387 | 0.0023 | 1.8450 | 0.9399 | 0.0079 | |
2013 | −2.7494 | −1.3204 | 0.0011 | −0.7275 | −0.2841 | 0.0033 | 0.0532 | −0.2678 | 0.0046 |
FS measures departure from neutrality based on Fu (1997), where negative values are evidence for an excess number of alleles and suggest recent population growth, while positive values are evidence for a deficiency of alleles from a recent bottleneck; D measures departure from neutrality based on Tajima (1989), where negative values suggest rapid population growth, while positive values indicate population contraction; Nucleotide diversity (π) is based on (Nei and Li, 1979).
The asterisk (*) denotes values with significant (P < 0.05) deviation from neutrality based on either the FS or D test.