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. 2019 Aug 7;20:158. doi: 10.1186/s13059-019-1769-1

Fig. 7.

Fig. 7

Jaccard distance versus the ratio between coverage and percentage of additional reactions for draft reconstructions. We used the Jaccard distance and the ratio to measure the similarity between the draft reconstructions and the corresponding manually curated model, in this case, when the networks are analyzed in terms of reactions. Draft reconstructions for Lactobacillus plantarum and Bordetella pertussis are represented in panels a and b, respectively. For both cases, the networks more similar to the manually curated models are located on the top left side of the plot. Thus, the draft reconstructions more similar, in terms of reactions, to the manually curated models were created by AuReMe, MetaDraft, and CarveMe