Table 5.
Mean Molecular Signature Database Pathway Coverage
C2-CP subcategory | Zebrafish S1500+ | Human S1500+ | Zebrafish full transcriptome | Human full transcriptome |
---|---|---|---|---|
C2-CP | 47.4 | 45.4 | 91.9 | 99.0 |
C2-CP-KEGG | 38.3 | 36.0 | 85.8 | 98.3 |
C2-CP-REACTOME | 39.4 | 37.0 | 86.9 | 95.9 |
C2-CP-BIOCARTA | 53.6 | 53.0 | 90.8 | 98.0 |
Hallmark | 40.4 | 38.0 | 88.5 | 98.7 |
Coverage (percent of measured/extrapolated genes per pathway, on average) is displayed based on the human S1500+, Zf S1500+, and human/zebrafish full extrapolated transcriptomes.
KEGG, Kyoto Encyclopedia of Genes and Genomes.