Table 3.
Probe | CHR | Location | Analyses race/ethnic group | Gene | Effect estimate in MESA | MESA p-valuea |
MESA q-valuea |
MESA interaction p-valueb |
Effect estimate in CHSc | p-value in CHSc | p-value meta analysisd |
---|---|---|---|---|---|---|---|---|---|---|---|
cg25472882 | 7 | 1112040 | Combined | C7orf50 | 15.26 | 6.59e-08 | 0.0237 | 0.312 | −1.77 | 0.49 | 0.00125 |
cg12833508 | 2 | 224701802 | AA | AP1S3 | −17.31 | 1.38e-07 | 0.0393 | 0.00021 | 1.19 | 0.54 | 1.42e-02 |
cg26609398 | 16 | 2752235 | AA | KCTD5 | −14.88 | 2.33e-07 | 0.0412 | 0.00067 | −3.30 | 0.028 | 4.95e-06 |
cg13687497 | 9 | 137249839 | AA | RXRA | −20.98 | 3.66e-07 | 0.0393 | 0.00024 | −3.90 | 0.045 | 2.63e-05 |
aModels adjusted for age, sex, residual cell type enrichment, site of recruitment, and top five principal components calculated within the group listed in the analysis column. If Analyses column indicates ‘Combined’, adjustment was also made for self-reported race/ethnicity.
bModels adjusted for age, sex, residual cell type enrichment, recruitment site, top five principal components in the overall sample, and self-reported race/ethnicity when testing for interaction between DNAm Beta-value and self-reported race/ethnicity in overall sample.
cAssociation results in respective CHS analysis. p-value is based on one-sided p-values informed by the direction of effect.
d p-value from meta-analysis of MESA and CHS. Genomic locations are provided in genome build 37.