Table 1.
Sequence comparison among SCMV full‐length infectious clones
| Clonea |
SCMV cistron Amino acid position in SCMV polyprotein |
||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| P1 | HC‐Pro | 6k1 | CI | VPg | NIb | CP | |||||||||
| 40 | 100 | 555 | 558 | 1,103 | 1,216 | 1,229 | 1,528 | 1,536 | 1,983 | 2,354 | 2,504 | 2,736 | 2,953 | 3,076 | |
| SC159b | R | I | S | P | Q | L | R | M | V | ‐(G) | ‐(L) | ‐(D) | ‐(L) | ‐(F) | ‐(Q) |
| SC163 | Q | T | S | P | P | P | C | T | A | E | L | D | P | L | P |
| SC129 | Q | I | F | S | P | L | C | M | V | G | P | G | L | F | Q |
| Set143c | Q | I | S/F | P/S | P | L | C | M | V | G | L | D | L | F | Q |
a
Amino acid differences are shown for the three individual clones of Set129 (SC129, SC159, and SC163). For Set143, a summary is provided.
b
The predicted amino acid in parentheses is not made due to a frameshift.
c
Amino acids in italics are conserved with 18 full‐length SCMV genomes in GenBank nr (release 192).