Table 1.
Genbank accession numbers for DNA sequences used in the phylogenetic analyses.
| Species | Voucher | 16S | ND1 | RAG1 | GenSeq Nomenclature |
|---|---|---|---|---|---|
| Craugastor talamancae | QCAZ 30675 | MK881414 | MK881414 | MK881322 | genseq-3 |
| Epipedobates boulengeri | QCAZ 42251 | MK881437 | NA | MK881337 | genseq-4 |
| P. appendiculatus | QCAZ 16365 | MK881401 | NA | MK881315 | genseq-4 |
| P. atillo sp. nov. | QCAZ 31946 | MK881419 | NA | MK881324 | genseq-2 |
| QCAZ 40584 | MK881435 | NA | MK881335 | genseq-2 | |
| QCAZ 42485 | MK881438 | NA | MK881338 | genseq-2 | |
| QCAZ 42486 | MK881439 | NA | MK881339 | genseq-2 | |
| QCAZ 42488 | MK881440 | NA | MK881340 | genseq-2 | |
| QCAZ 42489 | MK881441 | NA | MK881341 | genseq-2 | |
| QCAZ 42492 | MK881442 | NA | MK881342 | genseq-2 | |
| QCAZ 42496 | MK881443 | NA | MK881343 | genseq-2 | |
| QCAZ 42498 | MK881444 | NA | MK881344 | genseq-2 | |
| QCAZ 42499 | MK881445 | NA | MK881345 | genseq-2 | |
| QCAZ 42500 | MK881446 | NA | MK881346 | genseq-1 | |
| QCAZ 42501 | MK881447 | NA | MK881347 | genseq-2 | |
| QCAZ 42503 | MK881448 | NA | MK881348 | genseq-2 | |
| QCAZ 42505 | MK881449 | NA | MK881349 | genseq-2 | |
| QCAZ 42506 | MK881450 | NA | MK881350 | genseq-2 | |
| QCAZ 42512 | MK881451 | NA | MK881351 | genseq-2 | |
| QCAZ 42543 | MK881452 | NA | MK881352 | genseq-2 | |
| QCAZ 42548 | MK881453 | NA | MK881353 | genseq-2 | |
| P. atratus | QCAZ 45580 | MK881471 | MK881471 | MK881364 | genseq-4 |
| QCAZ 45645 | MK881473 | MK881473 | MK881366 | genseq-4 | |
| P. bicantus | QCAZ 31860 | MK881417 | NA | NA | genseq-4 |
| QCAZ 31986 | MK881420 | NA | MK881325 | genseq-4 | |
| P. cajamarcensis | KU 217845 | EF493663 | NA | NA | genseq-4 |
| QCAZ 17142 | MK881403 | MK881403 | MK881317 | genseq-4 | |
| QCAZ 24648 | MK881405 | NA | NA | genseq-4 | |
| QCAZ 31474 | MK881416 | NA | NA | genseq-4 | |
| P. ceuthospilus | CORBIDI 4306 | MK881397 | MK881397 | MK881311 | genseq-4 |
| P. chomskyi sp. nov. | QCAZ 45666 | MK881476 | MK881476 | MK881369 | genseq-2 |
| QCAZ 45669 | MK881477 | MK881477 | MK881370 | genseq-1 | |
| P. cryptomelas | QCAZ 45612 | MK881472 | MK881472 | MK881365 | genseq-4 |
| QCAZ 45660 | MK881475 | MK881475 | MK881368 | genseq-4 | |
| P. curtipes | QCAZ 17505 | MK881404 | MK881404 | MK881318 | genseq-4 |
| QCAZ 39568 | MK881429 | MK881429 | NA | genseq-4 | |
| QCAZ 39569 | MK881430 | MK881430 | NA | genseq-4 | |
| P. eremitus | QCAZ 43392 | MK881460 | NA | NA | genseq-4 |
| P. gagliardoi | QCAZ 42575 | MK881456 | NA | MK881355 | genseq-4 |
| QCAZ 46738 | MK881480 | NA | MK881372 | genseq-3 | |
| P. glandulosus | QCAZ 40153 | MK881431 | MK881431 | MK881333 | genseq-4 |
| P. gloria sp. nov. | KU 218035 | EF493348 | NA | NA | genseq-4 |
| QCAZ 16448 | MK881402 | MK881402 | MK881316 | genseq-2 | |
| QCAZ 31455 | MK881415 | NA | NA | genseq-2 | |
| QCAZ 56463 | MK881502 | NA | NA | genseq-2 | |
| QCAZ 57201 | MK881503 | NA | NA | genseq-1 | |
| P. hampatusami | QCAZ 58042 | MK881504 | MK881504 | MK881387 | genseq-3 |
| P. jimenezi sp. nov. | QCAZ 45170 | MK881466 | MK881466 | MK881360 | genseq-1 |
| QCAZ 45178 | MK881468 | MK881468 | MK881362 | genseq-2 | |
| QCAZ 46977 | MK881481 | MK881481 | MK881373 | genseq-2 | |
| QCAZ 46978 | MK881482 | MK881482 | MK881374 | genseq-2 | |
| P. kichwarum | QCAZ 25766 | JN991458 | NA | JQ025196 | genseq-4 |
| P. latidiscus | QCAZ 17101 | EF493354 | NA | EF493440 | genseq-4 |
| QCAZ 25852 | JN991451 | NA | JQ025188 | genseq-4 | |
| P. lividus | QCAZ 54322 | MK881497 | MK881497 | MK881382 | genseq-4 |
| P. lutzae sp. nov. | QCAZ 27471 | MK881410 | NA | NA | genseq-2 |
| QCAZ 27534 | MK881411 | NA | NA | genseq-2 | |
| QCAZ 27597 | MK881412 | NA | NA | genseq-2 | |
| QCAZ 32785 | MK881421 | MK881421 | MK881326 | genseq-2 | |
| QCAZ 32786 | MK881422 | MK881422 | MK881327 | genseq-2 | |
| QCAZ 32791 | MK881424 | MK881424 | MK881329 | genseq-2 | |
| QCAZ 37546 | MK881428 | NA | NA | genseq-2 | |
| QCAZ 47211 | MK881487 | NA | NA | genseq-2 | |
| QCAZ 53728 | MK881495 | NA | NA | genseq-1 | |
| P. multicolor sp. nov. | QCAZ 47213 | MK881488 | NA | NA | genseq-1 |
| QCAZ 47214 | MK881489 | NA | NA | genseq-2 | |
| P. muscosus | QCAZ 54857 | MK881501 | MK881501 | MK881386 | genseq-4 |
| P. nangaritza sp. nov. | QCAZ 41710 | MK881436 | MK881436 | MK881336 | genseq-1 |
| P. omeviridis | QCAZ 10564 | MK881398 | NA | MK881312 | genseq-4 |
| P. petrobardus | KU 212293 | EF493367 | NA | NA | genseq-2 |
| P. philipi | KU 217863 | EF493672 | NA | NA | genseq-3 |
| QCAZ 37528 | MK881425 | MK881425 | MK881330 | genseq-3 | |
| QCAZ 37537 | MK881426 | MK881426 | MK881331 | genseq-3 | |
| QCAZ 37542 | MK881427 | MK881427 | MK881332 | genseq-3 | |
| P. phoxocephalus | QCAZ 58463 | MK881507 | MK881507 | MK881390 | genseq-3 |
| P. pichincha | QCAZ 11673 | MK881399 | MK881399 | MK881313 | genseq-4 |
| P. pycnodermis | KU 218028 | EF493680 | NA | NA | genseq-4 |
| KU 218030 | EF493683 | NA | NA | genseq-4 | |
| P. quaquaversus | QCAZ 25676 | JN991463 | NA | JQ025201 | genseq-4 |
| P. rubicundus | QCAZ 26551 | MK881407 | MK881407 | MK881320 | genseq-4 |
| P. sobetes | QCAZ 11737 | MK881400 | NA | MK881314 | genseq-4 |
| P. spinosus | KU 218052 | EF493673 | NA | NA | genseq-4 |
| P. sternothylax | CORBIDI 13316 | MK881393 | MK881393 | MK881308 | genseq-4 |
| P. teslai sp. nov. | QCAZ 46213 | MK881478 | NA | NA | genseq-1 |
| P. thymelensis | QCAZ 16428 | EF493516 | NA | EF493442 | genseq-4 |
| QCAZ 62801 | MK881508 | MK881508 | MK881391 | genseq-4 | |
| QCAZ 62803 | MK881509 | MK881509 | MK881392 | genseq-4 | |
| P. tinguichaca | QCAZ 31945 | MK881418 | MK881418 | MK881323 | genseq-3 |
| QCAZ 40581 | MK881432 | NA | NA | genseq-3 | |
| QCAZ 40582 | MK881433 | NA | MK881334 | genseq-3 | |
| QCAZ 42570 | MK881454 | NA | NA | genseq-3 | |
| QCAZ 42574 | MK881455 | NA | MK881354 | genseq-3 | |
| QCAZ 42576 | MK881457 | NA | MK881356 | genseq-3 | |
| QCAZ 42578 | MK881458 | NA | MK881357 | genseq-3 | |
| QCAZ 54601 | MK881498 | NA | MK881383 | genseq-3 | |
| QCAZ 54602 | MK881499 | NA | MK881384 | genseq-3 | |
| QCAZ 54603 | MK881500 | NA | MK881385 | genseq-3 | |
| P. torresi sp. nov. | QCAZ 47342 | MK881490 | NA | NA | genseq-1 |
| QCAZ 47397 | MK881492 | MK881492 | MK881380 | genseq-2 | |
| P. totoroi sp. nov. | KU 218025 | EF493349 | NA | NA | genseq-4 |
| QCAZ 25105 | MK881406 | MK881406 | MK881319 | genseq-1 | |
| QCAZ 58425 | MK881505 | MK881505 | MK881388 | genseq-2 | |
| P. unistrigatus | KU 218057 | EF493387 | NA | EF493444 | genseq-4 |
| P. verrucolatus sp. nov. | QCAZ 45174 | MK881467 | MK881467 | MK881361 | genseq-2 |
| QCAZ 45195 | MK881469 | MK881469 | MK881363 | genseq-2 | |
| QCAZ 46982 | MK881483 | MK881483 | MK881375 | genseq-1 | |
| QCAZ 46992 | MK881484 | MK881484 | MK881376 | genseq-2 | |
| QCAZ 46993 | MK881485 | MK881485 | MK881377 | genseq-2 | |
| P. versicolor | KU 218096 | EF493389 | NA | EF493431 | genseq-4 |
| QCAZ 45650 | MK881474 | MK881474 | MK881367 | genseq-4 | |
| QCAZ 46310 | MK881479 | MK881479 | MK881371 | genseq-4 | |
| P. wiensi | KU 219796 | EF493668 | NA | NA | genseq-2 |
| P. yumbo | QCAZ 52241 | MK881494 | NA | MK881381 | genseq-3 |
| QCAZ 58450 | MK881506 | MK881506 | MK881389 | genseq-4 | |
| Pristimantis sp. (CCS1) | QCAZ 32790 | MK881423 | MK881423 | MK881328 | genseq-4 |
| Pristimantis sp. (CCS2) | QCAZ 45129 | MK881462 | MK881462 | MK881358 | genseq-4 |
| QCAZ 45155 | MK881465 | MK881465 | MK881359 | genseq-4 | |
| Pristimantis sp. (UCS1) | QCAZ 53999 | MK881496 | NA | NA | genseq-4 |
| Pristimantis sp. (UCS2) | QCAZ 45029 | MK881461 | NA | NA | genseq-4 |
| Pristimantis sp. (UCS3) | QCAZ 26642 | MK881409 | NA | NA | genseq-4 |
| Pristimantis sp. | CORBIDI 14804 | MK881394 | MK881394 | MK881309 | genseq-4 |
| CORBIDI 14805 | MK881395 | NA | NA | genseq-4 | |
| CORBIDI 2848 | MK881396 | MK881396 | MK881310 | genseq-4 | |
| QCAZ 26586 | MK881408 | NA | MK881321 | genseq-4 | |
| QCAZ 29206 | MK881413 | NA | NA | genseq-4 | |
| QCAZ 40583 | MK881434 | NA | NA | genseq-4 | |
| QCAZ 43024 | MK881459 | NA | NA | genseq-4 | |
| QCAZ 45131 | MK881463 | NA | NA | genseq-4 | |
| QCAZ 45142 | MK881464 | NA | NA | genseq-4 | |
| QCAZ 45210 | MK881470 | NA | NA | genseq-4 | |
| QCAZ 47002 | MK881486 | MK881486 | MK881378 | genseq-4 | |
| QCAZ 47353 | MK881491 | MK881491 | MK881379 | genseq-4 | |
| QCAZ 50732 | MK881493 | NA | NA | genseq-4 |