TABLE 1.
Summary statistics of whole-genome assemblies
| Strain | Coverage (×) | No. of contigs | Assembly size (bp) | Contig N50 (bp) | G+C content (%) | Gene annotation data (no.) |
STb | Taxonomic affiliation |
Reference genome | GenBank accession no. | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Genes | CDSa | rRNAs | tRNAs | Genus | Species | |||||||||
| CaG_5A | 238 | 28 | 1,547,878 | 313,244 | 28.45 | 1,598 | 1,552 | 4 | 41 | NA | Campylobacter | volucris | GCF_000816345 | SMTU00000000 |
| CaG_58BB | 231 | 50 | 1,537,596 | 170,866 | 29.50 | 1,553 | 1,513 | 2 | 37 | NA | Campylobacter | lari | GCA_000816385 | SMTT00000000 |
| CaG_63A | 197 | 45 | 1,687,991 | 219,579 | 30.46 | 1,773 | 1,729 | 3 | 40 | 2654 | Campylobacter | jejuni | GCA_000737085 | SMTS00000000 |
| CaG_70BB | 228 | 19 | 1,569,087 | 436,706 | 28.41 | 1,631 | 1,585 | 4 | 41 | NA | Campylobacter | volucris | GCA_000816345 | SMTR00000000 |
a
CDS, coding sequences.
b
ST, sequence type (in silico MLST; aspA, glnA, gltA, glyA, pgm, tkt, uncA); NA, not assigned.