Table 1.
RBMY1 copy number estimates for 14 samples used in fibre-FISH experiments
| Fibre-FISH | ||||||||
|---|---|---|---|---|---|---|---|---|
| Sample ID | Y haplogroup and terminal marker * | Region 1 | Region 2 | Region 3 | Region 4 | Total | CN from read depth | CN from ddPCR |
| HG02141 | C3f-F2613 | 4 | 7 | 1 | 1 | 13 | 12.9 | 12.9 |
| HG01699 | E1b1b1b1-L19 | 6 | 2 | 1 | 1 | 10 | 10.7 | 9.8 |
| HG02224 | G2a3-L30 | 4 | 3 | 1 | 2 | 10 | 10.9 | 10.4 |
| HG02789 | G2b1-M283 | 4 | 3 | 1 | 1 | 9 | 9.5 | 8.2 |
| HG02020 | O2a1a-M88 | 4 | 5 | 1 | 1 | 11 | 10.5 | 10.8 |
| HG02032 | O2a1a-M88 | 4 | 2 | 1 | 1 | 8 | 8.4 | 7.8 |
| HG00704** | O3a2b1-M188 | 5 | 2 | 1 | 1 | 9 | 8.7 | 8.8 |
| HG00692** | O3a2b1-M188 | 3 | 2 | 1 | 1 | 7 | 7.0 | 6.8 |
| NA19774*** | Q1a2a1-L54 | 4 + 2 | 1 | 1 | 1 | 9 | 8.9 | 8.5 |
| HG01977 | Q1a2a1a1-M3 | 5 | 4 | 1 | 1 | 11 | 10.4 | 10.7 |
| HG01938 | Q1a2a1a1-M3 | 2 | 2 | 1 | 1 | 6 | 6.6 | 6.3 |
| HG03652 | Q1b-F711 | 2 | 1 | 1 | 1 | 5 | 5.1 | 5.2 |
| HG03899 | R1a1a1b2a1-L657 | 5 | 4 | 1 | 1 | 11 | 12.0 | 10.5 |
| NA10851 | R1b1a2a1a2c1i-CTS6581 | 2 | 2 | 1 | 1 | 6 | 5.7 | 5.8 |
CN, copy number; *, according to Poznik et al. (2016) (19); **, inversion of regions ‘1’ and ‘2’; ***, partial duplication of region ‘1’ giving rise to a total of five regions in this sample and inversion of regions ‘3’ and ‘4’.