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. 2019 Aug 9;20:641. doi: 10.1186/s12864-019-5996-3

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — Precision and recall of DiscoverY on human data. Each marker represents the result of a DiscoverY experiment. The shape of the marker represents the male assembly used, and color of each marker represents the female reference used. The black, x-shaped markers connected by a dashed line show the performance of DiscoverY with female raw reads (instead of a female reference) at various levels of autosomal coverage. The CQ method is shown as a grey curve extrapolated from running CQ with thresholds 0.1 to 0.5 (in increments of 0.1)