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. 2019 Aug 2;9:720. doi: 10.3389/fonc.2019.00720

Table 1.

p-Tvax epitopes.

N. Antigen Start position Peptide Length
1 KIF20A 860 Ac-SSTDSSPYARILRSRHSPLLK-amide 21
2 KIF2C 356 GDLSGKSQNASKGIYAMASRDVFLLKN-amide 27
3 MMP9 594 RVFFFSGRQMWVYTGKTVLGPRSLDKLGL-amide 29
4 MNDA 298 Ac-NETSSVLEAAPKQMIEVPNCITRN -amide 24
5 OLFML2B 50 DNQENVLSQLLGDYDKVKAVSEGSD-amide 25
6 TROAP 156 Ac-KGGTTQRGQSARSSAYLAPRIPTH-amide 24
7 ULBP1 56 Ac-LNRQPLFVYKDKKCHAIGAHRNSMNATKI-amide 29

Amino acid sequences of each antigen were screened with EpiMatrix to identify epitopes with potential immune stimulatory properties in BALB/c mice. Putative regulatory T cells epitopes (Tregitopes), which promote suppression of vaccine-induced T cell responses, and autoimmune epitopes (autoepitopes) that have potential of inducing autoimmune reactions were selected against using JanusMatrix algorithm. For each antigen, a peptide that contained both MHC-I and -II epitopes was synthetized as listed and used for vaccination, or for detection of antigen-specific immune responses.