Antibodies |
Mouse Monoclonal Anti-FLAG M2 Antibody |
Sigma-Aldrich |
Cat# F1804 |
Peroxidase AffiniPure Goat Anti-Mouse IgG (H+L) |
Jackson ImmonuResearch Laboratories |
Cat# 115–035-003 |
Bacterial and Virus Strains |
E. coli BL21(DE3) |
NEB |
Cat# C2527I |
E. coli DH10Bac |
ThermoFisher Scientific |
Cat# 10361–012 |
Chemicals, Peptides, and Recombinant Proteins |
Gramicidin |
Sigma-Aldrich |
Cat# G5002 |
Digitonin, High Purity |
Millipore Sigma |
Cat# 300410 |
1,2-Dimyristoyl-sn-Glycero-3-Phosphocholine (DMPC) |
Anatrace |
Cat# D514 |
Anti-FLAG M2 Affinity Gel |
Millipore Sigma |
Cat# A2220 |
FLAG peptide DYKDDDDK |
Bio Basic |
N/A |
Deposited Data |
Coordinates and Structure Factors of NaVAb G94C/Q150C ∆28 |
This study |
PDB: 6P6X |
Coordinates and Structure Factors of NaVAb V100C/Q150C ∆28 |
This study |
PDB: 6P6Y |
Coordinates of NaVAb KAV/G94C/Q150C |
This study |
PDB: 6P6W |
Cryo-EM Map of NaVAb KAV/G94C/Q150C |
This study |
EMDB: EMD-20265 |
Experimental Models: Cell Lines |
Spodoptera frugiperda (Sf9) |
Life Technologies |
B825–01 |
Trichoplusia ni (High Five) |
Life Technologies |
B855–02 |
Recombinant DNA |
pET-21b FLAG-NaVAb |
This study |
N/A |
pFastBacDual FLAG-NaVAb |
Payandeh et al., 2012 |
N/A |
pFastBacDual FLAG-NaVAb G94C/Q150C ∆28 |
This study |
N/A |
pFastBacDual FLAG-NaVAb V100C/Q150C ∆28 |
This study |
N/A |
pFastBacDual MBP-NaVAb KAV/G94C/Q150C |
This study |
N/A |
pIZT GFP-P2A-NaVAb |
This study |
N/A |
Software and Algorithms |
HKL2000 |
HKL Research |
http://www.hkl-xray.com |
CCP4i 7.0.068 |
CCP4 |
http://www.ccp4.ac.uk |
Coot 0.8.9.1 |
MRC |
https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot |
Leginon 3.3 |
NRAMM |
http://leginon.org |
MotionCor2 |
UCSF |
https://msg.ucsf.edu/software |
Gctf |
MRC |
https://www.mrc-lmb.cam.ac.uk/kzhang |
Relion 3.0 beta |
MRC |
https://www2.mrc-lmb.cam.ac.uk/relion |
CisTEM 1.0.0-beta |
|
https://cistem.org |
MonoRes |
Scipion |
http://scipion.cnb.csic.es/m/myresmap |
Chimera 1.11.2 |
UCSF |
https://www.cgl.ucsf.edu/chimera |
Phenix 1.14–3260 |
|
https://www.phenix-online.org |
IGOR Pro 6.37 |
WaveMetrics |
https://www.wavemetrics.com |
Pymol 1.7.2 |
Schrödinger |
https://pymol.org |