Table 2.
Kinetic parameters of candidate OHB decarboxylases on 2-keto-4-hydroxybutyrate (OHB) and corresponding natural substrates.
Enzyme | Natural substratea | 2-keto-4-hydroxybutyrate | Specificityc | |||||
---|---|---|---|---|---|---|---|---|
Vmax [U mg−1] | KM [10−3 M] | Vmax/KM [U mg−1 M−1]b | Vmax [U mg−1] | KM [10−3 M] | Ki [10−3 M] | Vmax/KmM [U mg−1 M−1]b | ||
Zm-Pdc | 49.56 (±1.20) | 1.7 (±0.2) | 29,416 (±4,625) | 0.01 (±0.0003) | 0.4 (±0.2) | — | 34 (±13) | 864 |
Zm-Pdc W392Q | 1.74 (±0.32) | 5.2 (±0.3) | 335 (±83) | 0.02 (±0.004) | 0.5 (±0.2) | 5.0 (±0.4) | 46 (±23) | 7 |
Ll-KdcA | 2.66 (±0.17) | 2.7 (±0.2) | 416 (±43) | 0.02 (±0.001) | 2.5 (±1.6) | — | 9 (±5) | 48 |
Ll-KdcA V461I | 2.89 (±0.52) | 5.1 (±1.1) | 590 (±233) | 0.04 (±0.0001) | 1.3 (±0.5) | — | 31 (±12) | 19 |
Data presented are the mean (±S.D.) of at least two replicates.
aNatural substrates were used as follows: pyruvate for Zm-Pdc, 3-methyl-2-ketobutyric acid for Ll-KdcA.
bActivities were estimated in U mg−1 purified protein.
cSpecificity corresponds to the ratio of (vmax/Km) between natural substrate and OHB.