Table 2.
KEGG pathway analysis of turquoise module
| ID | Description | GeneRatio | p-value | p. adjust | qvalue | Count |
|---|---|---|---|---|---|---|
| hsa04658 | Th1 and Th2 cell differentiation | 29/497 | 4.61E-13 | 1.33E-10 | 1.06E-10 | 29 |
| hsa04659 | Th17 cell differentiation | 31/497 | 9.01E-13 | 1.33E-10 | 1.06E-10 | 31 |
| hsa04640 | Hematopoietic cell lineage | 27/497 | 7.70E-11 | 6.66E-09 | 5.30E-09 | 27 |
| hsa04672 | Intestinal immune network for IgA production | 19/497 | 8.99E-11 | 6.66E-09 | 5.30E-09 | 19 |
| hsa05150 | Staphylococcus aureus infection | 19/497 | 1.31E-09 | 7.73E-08 | 6.16E-08 | 19 |
| hsa05166 | Human T-cell leukemia virus 1 infection | 39/497 | 1.00E-08 | 4.94E-07 | 3.93E-07 | 39 |
| hsa04662 | B cell receptor signaling pathway | 20/497 | 1.84E-08 | 7.79E-07 | 6.20E-07 | 20 |
| hsa05416 | Viral myocarditis | 18/497 | 2.42E-08 | 8.94E-07 | 7.12E-07 | 18 |
| hsa05310 | Asthma | 13/497 | 2.92E-08 | 9.60E-07 | 7.65E-07 | 13 |
| hsa05169 | Epstein-Barr virus infection | 36/497 | 3.25E-08 | 9.61E-07 | 7.66E-07 | 36 |
| hsa04064 | NF-kappa B signaling pathway | 23/497 | 3.70E-08 | 9.95E-07 | 7.92E-07 | 23 |
| hsa04514 | Cell adhesion molecules (CAMs) | 28/497 | 1.96E-07 | 4.83E-06 | 3.85E-06 | 28 |
| hsa05140 | Leishmaniasis | 19/497 | 2.13E-07 | 4.85E-06 | 3.86E-06 | 19 |
| hsa05330 | Allograft rejection | 13/497 | 4.97E-07 | 1.05E-05 | 8.37E-06 | 13 |
| hsa05332 | Graft-versus-host disease | 13/497 | 1.34E-06 | 2.65E-05 | 2.11E-05 | 13 |
| hsa04612 | Antigen processing and presentation | 18/497 | 1.98E-06 | 3.66E-05 | 2.92E-05 | 18 |
| hsa04062 | Chemokine signaling pathway | 31/497 | 2.18E-06 | 3.80E-05 | 3.02E-05 | 31 |
| hsa04940 | Type I diabetes mellitus | 13/497 | 2.47E-06 | 4.06E-05 | 3.23E-05 | 13 |
| hsa05340 | Primary immunodeficiency | 12/497 | 2.63E-06 | 4.10E-05 | 3.27E-05 | 12 |
| hsa05321 | Inflammatory bowel disease (IBD) | 16/497 | 3.57E-06 | 5.28E-05 | 4.21E-05 | 16 |
| hsa05145 | Toxoplasmosis | 22/497 | 3.96E-06 | 5.58E-05 | 4.45E-05 | 22 |
| hsa05320 | Autoimmune thyroid disease | 14/497 | 5.98E-06 | 7.70E-05 | 6.14E-05 | 14 |
| hsa05152 | Tuberculosis | 29/497 | 5.99E-06 | 7.70E-05 | 6.14E-05 | 29 |
| hsa04660 | T cell receptor signaling pathway | 20/497 | 8.33E-06 | 0.000103 | 8.18E-05 | 20 |
| hsa05130 | Pathogenic Escherichia coli infection | 14/497 | 9.57E-06 | 0.000113 | 9.03E-05 | 14 |
Abbreviation: KEGG, Kyoto Encyclopedia of Genes and Genomes.