Table 3.
Common genes between different algorithms and the hub gene obtained from TCGA
| Categories | Elements | Count |
|---|---|---|
| MCC & TCGA & degree | NCKAP1L/IL10RA/TRAF3IP3/WAS/SASH3 | 5 |
| MCC & degree | CORO1A/SP140/GIMAP4/PPP1R16B/IRF8/PRKCB1/HCST/PARVG/CD53/DOCK2/AKNA/ITK/GIMAP7/TBC1D10C/GIMAP5/ARHGAP9/ITGAL/BTK | 18 |
| TCGA & degree | SLA/APBB1IP | 2 |
| Degree only | P2RY8/GPSM3/CCR7/SH2D1A/LAT2 | 5 |
| MCC only | ARHGEF6/RCSD1/FAM65B/GMFG/DOCK8/FAIM3/Septin 6 | 7 |
| TCGA only | PTPN22/FERMT3/GIMAP6/DOK2/CELF2/SELPLG/TNFRSF1B/MYO1F/WIPF1/UBASH3A/AMICA1 | 11 |
Abbreviations: TCGA, The Cancer Genome Atlas; MCC, Matthews correlation coefficient.