TABLE 1.
Variable positions in OMPs sequence related to pathotype or AIEC phenotypic characteristics are depicted.
All strains |
Adhesion index |
Invasion index |
||||||
Variable position | Amino acid | Non-AIEC (n = 30) | AIEC (n = 14) | p-value | Bacteria/cell | p-value | % * | p-value |
OmpA | ||||||||
200 | A | 80.0% | 42.9% | 0.018 | 4.1 ± 7.4 | 0.044 | 0.184 ± 0.457 | 0.084 |
V | 20.0% | 57.1% | 7.8 ± 7.9 | 0.224 ± 0.359 | ||||
OmpC | ||||||||
232 | D | 62.1% | 85.7% | 0.108 | 6.5 ± 8.0 | 0.017 | 0.229 ± 0.474 | 0.002 |
A | 37.9% | 14.3% | 2.9 ± 6.5 | 0.060 ± 0.157 | ||||
231 | W | 31.0% | 64.3% | 0.041 | 6.4 ± 8.1 | 0.189 | 0.315 ± 0.589 | 0.058 |
D | 69.0% | 35.7% | 4.6 ± 7.5 | 0.079 ± 0.158 | ||||
89 | S | 31.0% | 64.3% | 0.041 | 6.4 ± 8.1 | 0.372 | 0.314 ± 0.589 | 0.109 |
N | 69.0% | 35.7% | 4.7 ± 7.4 | 0.080 ±0.158 | ||||
220 | V | 20.7% | 57.1% | 0.022 | 7.9 ± 8.6 | 0.078 | 0.366 ±0.653 | 0.022 |
I | 79.3% | 42.9% | 4.2 ± 7.0 | 0.087 ± 0.169 | ||||
OmpF | ||||||||
51 | E | 80.0% | 100.0% | 0.084 | 6.1 ± 7.9 | 0.040 | 0.198 ± 0.433 | 0.322 |
V | 20.0% | 0.0% | 0.2 ± 0.4 | 0.021 ± 0.019 | ||||
60 | M | 80.0% | 100.0% | 0.084 | 6.1 ± 7.9 | 0.040 | 0.198 ± 0.433 | 0.322 |
K | 20.0% | 0.0% | 0.2 ± 0.4 | 0.021 ± 0.019 |
In bold statistically significant comparisons are indicated. For each position, the first amino acid presented is the one present in the LF82 reference strain. Adhesion and invasion indices were obtained from raw data in Supplementary Table S1. *Percentage of intracellular bacteria after 1 h gentamicin treatment relative to the inoculum.