Table 1.
Twenty-seven significant SNPs jointly screened by the Bayesian Model and Logical regression analysis model.
| Ref_ID | Chromosome | Bayesian analysis | Logical regression analysis | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| P* | CHISQ | OR | L95 | U95 | P** | OR | L95 | U95 | STAT | ||
| rs47045687 | AC_000159.1 | 0.000106 | 15.02 | 14.21 | 2.937 | 68.76 | 0.004718 | 11.36 | 2.106 | 61.32 | 2.826 |
| rs114843903 | AC_000159.1 | 0.000628 | 11.69 | 0.1678 | 0.05817 | 0.4842 | 0.006341 | 0.215 | 0.07128 | 0.6483 | −2.73 |
| rs90835937 | AC_000160.1 | 0.00067 | 11.57 | 5.808 | 2.038 | 16.55 | 0.007839 | 3.838 | 1.424 | 10.34 | 2.659 |
| rs5881560 | AC_000162.1 | 0.000877 | 11.07 | 0.1406 | 0.04076 | 0.4852 | 0.005781 | 0.1412 | 0.03515 | 0.5669 | −2.76 |
| rs8678060 | AC_000162.1 | 0.000465 | 12.25 | 6.929 | 2.196 | 21.86 | 0.00522 | 5.866 | 1.695 | 20.3 | 2.793 |
| rs37588412 | AC_000162.1 | 0.000842 | 11.15 | 6 | 1.994 | 18.06 | 0.009236 | 4.128 | 1.42 | 12 | 2.603 |
| rs75762330 | AC_000165.1 | 0.000259 | 9.078 | 7.07 | 1.78 | 28.08 | 0.00127 | 6.605 | 1.496 | 29.15 | 2.492 |
| rs88640083 | AC_000165.1 | 0.000192 | 5.477 | 9.25 | 1.047 | 81.7 | 0.00314 | 12 | 1.248 | 115.4 | 2.152 |
| rs17176625 | AC_000166.1 | 0.000512 | 12.07 | 6.662 | 2.185 | 20.31 | 0.0069 | 4.749 | 1.534 | 14.71 | 2.702 |
| rs17514753 | AC_000166.1 | 0.000126 | 14.7 | 0.1146 | 0.03528 | 0.3725 | 0.00321 | 0.03618 | 0.003978 | 0.329 | −2.947 |
| rs17518215 | AC_000166.1 | 0.000561 | 11.9 | 0.1605 | 0.05443 | 0.4733 | 0.005858 | 0.05012 | 0.005962 | 0.4213 | −2.756 |
| rs22015301 | AC_000166.1 | 0.000247 | 13.44 | 0.1235 | 0.03669 | 0.4155 | 0.002015 | 0.1079 | 0.02628 | 0.4434 | −3.088 |
| rs98519900 | AC_000166.1 | 0.000538 | 11.98 | 6.25 | 2.131 | 18.33 | 0.007809 | 3.866 | 1.428 | 10.47 | 2.66 |
| rs14802054 | AC_000169.1 | 0.000684 | 11.53 | 6 | 2.058 | 17.5 | 0.005923 | 8.018 | 1.821 | 35.32 | 2.752 |
| rs25949166 | AC_000170.1 | 2.68E-05 | 17.64 | 12.33 | 3.262 | 46.63 | 0.001027 | 12.78 | 2.792 | 58.52 | 3.283 |
| rs33866959 | AC_000171.1 | 0.000366 | 12.7 | 7.222 | 2.309 | 22.59 | 0.00748 | 4.233 | 1.47 | 12.19 | 2.675 |
| rs48577224 | AC_000173.1 | 0.0003884 | 12.59 | 6 | 2.154 | 16.71 | 0.004518 | 4.881 | 1.634 | 14.58 | 2.84 |
| rs49099498 | AC_000173.1 | 7.08E-05 | 15.79 | 14.57 | 3.059 | 69.4 | 0.00866 | 7.677 | 1.676 | 35.16 | 2.625 |
| rs27017918 | AC_000175.1 | 0.000265 | 13.31 | 20.28 | 2.496 | 164.8 | 0.00583 | 21.89 | 2.441 | 196.4 | 2.757 |
| rs32265465 | AC_000175.1 | 0.000341 | 12.83 | 8 | 2.344 | 27.31 | 0.006382 | 5.728 | 1.634 | 20.08 | 2.727 |
| rs9704351 | AC_000177.1 | 0.000628 | 11.69 | 0.09167 | 0.01908 | 0.4404 | 0.001736 | 0.05793 | 0.009745 | 0.3444 | −3.132 |
| rs20438858 | AC_000180.1 | 0.00062 | 11.71 | 0.1515 | 0.04821 | 0.4762 | 0.009494 | 0.2394 | 0.08128 | 0.7052 | −2.594 |
| rs22490040 | AC_000180.1 | 0.000185 | 13.97 | 8.061 | 2.545 | 25.53 | 0.00419 | 6.859 | 1.836 | 25.62 | 2.863 |
| rs28580132 | AC_000180.1 | 0.0005616 | 11.9 | 7.143 | 2.199 | 23.21 | 0.008612 | 4.642 | 1.477 | 14.59 | 2.627 |
| rs3233588 | AC_000181.1 | 0.0006203 | 11.71 | 6.6 | 2.1 | 20.74 | 0.001532 | 12.28 | 2.603 | 57.92 | 3.169 |
| rs1988979 | AC_000182.1 | 8.24E-05 | 15.5 | 11.62 | 2.975 | 45.43 | 0.006471 | 6.124 | 1.662 | 22.57 | 2.723 |
| rs50888452 | AC_000187.1 | 0.000937 | 10.95 | 0.1667 | 0.05543 | 0.5011 | 0.008504 | 0.22 | 0.07121 | 0.6795 | −2.631 |
*
indicated the P-value calculated by Chi-square (< 0.001);
**
is the t-statistic P-value of the logical regression model (< 0.01).
CHISQ is Chi-square under Chi-square test. STAT is the t-statistic coefficient under the logistic regression model.
OR: Estimated odds ratio. L95: Lower bound of 95% confidence interval for odds ratio. U95: Upper bound of 95% confidence interval for odds ratio. Nan: meaningless number. Na: missing value or Not available.