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. 2019 Aug 6;10:675. doi: 10.3389/fgene.2019.00675

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Copyright © 2019 Kyriakis, Kanterakis, Manousaki, Tsakogiannis, Tsagris, Tsamardinos, Papaharisis, Chatziplis, Potamias and Tsigenopoulos

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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(A) Distribution of each examined trait in our samples. (B) Manhattan plot demonstrating the locations across the chromosomes of the sea bream genome (horizontal axis) versus the –log (p-values) of the association between the genetic variants and phenotype (vertical axis). The higher the dots, the stronger the genetic association. The significance threshold was set to 10^–4, in order to correct for multiple testing (dashed line). The different colors represent the different chromosomes. (C) Quantile–quantile (QQ) plot of the data shown in the Manhattan plot. The grey area represents the 95% simultaneous confidence bands. Red line is the diagonal (Y = X) or else how the observed data should be placed if they were normally distributed.