Table 3.
Selected SNPs from SES algorithm with significance threshold equal to 0.05 (best method based on median squared error).
| Variables | Locus | P-value | Beta coefficient | Threshold | GWAS | Conserved | Position |
|---|---|---|---|---|---|---|---|
| Weight | |||||||
| Chr1:16636968 | Ethanolamine-phosphate, cytidylyltransferase-like | 0.0006 | 121.84 | 0.01 | ✓ | ✓ | 3’ UTR |
| Chr6:12617755 | Myosin-7-like isoform X1,short transient receptor potential channel 4-associated | 0.0024 | 138.07 | 0.01 | ✓ | ✓ | Upstream |
| Chr8:11613979 | Semaphorin-3A | 0.0114 | 99 | 0.01 | – | ✓ | Intron |
| Chr16:2232897 | Acetylserotonin O-methyltransferase-like, LBH-like isoform X1 | 0.0022 | −193 | 0.01 | ✓ | – | 3’ UTR |
| Scaffold29:195838 | Mitogen-activated kinase-binding 1-like | 0.0285 | 64.669 | 0.05 | – | – | Intron |
| Chr24:8282385 | STE20-related kinase adapter beta | 0.0022 | 160.80 | 0.05 | – | ✓ | Downstream |
| Trafficking kinesin-binding 2 isoform X1 | Upstream | ||||||