Table 1. Oligonucleotides used in this study.
Restriction enzyme recognition sequences are capitalised. BsaI overhangs are underlined. Introduced mutations are in bolded capital letters. Additional oligonucleotides used for site-directed mutagenesis are listed in Tables S1 and S2 of Supplementary file 1.
Name | Sequence (5’ to 3’) | Function |
---|---|---|
F2-pUC19-BsaI | gcgAGATCTgtcgtGAGACCggtgatgacggtgaaaacct | gtsB mutagenesis vector construction |
R3-pUC19-MfeI-SpeI | actgcgACTAGTCAATTGattaatgcagctggcacgac | gtsB mutagenesis vector construction |
F-800Right | actgcgCAATTGagaccccggaagacatcag | gtsB mutagenesis vector construction |
R-800Right | actgcgTCTAGAcattgcgaagttcaagcgta | gtsB mutagenesis vector construction |
F2-gtsB-F | actgcgGGTCTCagtcgaaaagtcgcgacctacatgg | Conserved gtsB forward primer |
R3-gtsB-R | actgcgGGTCTCctgccggaCaccacggtcggccagctc | Conserved gtsB reverse primer |
4845-M13F | GTAAAACGACGGCCAGTTCCGACAGGCTGTAGTCCTT | gtsB sequencing primer |
R2-M13R-gtsB | GGAAACAGCTATGACCATGTGGTCCTCAGCTCGGAATA | gtsB sequencing primer |
SP1 | ACCACACCGAACAGGAAGTC | 5’ RACE cDNA synthesis |
B-SP2 | ACTGCGTCTAGAGACCAAGGTGATACCGATAAACA | 5’ RACE gtsB amplification |
B-SP3 | ACTGCGTCTAGACGAACAAGGCCAGGTTTTT | 5’ RACE gtsB amplification |
A-SP2 | ACTGCGTCTAGATTTCTTGTCGAGCAGGGAGT | 5’ RACE gtsA amplification |
A-SP3 | ACTGCGTCTAGATTCTTCTTTGGCGACGTCTT | 5’ RACE gtsA amplification |