Table 3.

Alpha diversity measures for microbial composition and ARGs.

Samplea	Taxa			ARGs
	Observed OTUs	Phylogenetic Diversity	Shannon	Shannon	Simpson
RS16	831	60.10	4.99	4.75	0.96
RM15	779	59.56	6.07	4.02	0.92
RM16	849	61.26	5.56	3.75	0.92
RL15	877	56.71	7.03	5.44	0.97
RL16	750	52.41	4.98	5.65	0.97
HA15	718	45.54	6.37	6.32	0.98
HA16	708	46.62	5.30	5.25	0.97
HB15	565	37.89	5.93	5.19	0.96
HB16	524	37.36	4.55	6.40	0.98
HC15	752	46.01	6.35	6.77	0.99
HC16	690	45.51	6.15	6.58	0.98

^aSample names as described in Table 1.