Bacterial and Virus Strains |
|
Top10 |
Fischer scientific (UK) |
C404010 |
BL21(DE3) |
Sigma-Aldrich, Merck |
CMC0014 |
|
Chemicals, Peptides, and Recombinant Proteins |
|
IBMX |
Fischer scientific (UK) |
PHZ1124 |
LY-83,583 |
Enzo Life Sciences, CAS: 91300-60-6 |
ALX-550-002-M005 |
Glutathione Sepharose 4B |
(GE Healthcare, Amersham, UK) |
GE17-0756-01 |
Brilliant III Ultra-Fast SYBR qPCR mastermix |
Agilent |
600882 |
Pectolyase Y23 |
Fischer scientific (UK) |
ICN320951 |
Cellulase RS |
SERVA Electrophoresis GmbH, Germany |
16420 |
Cellulysin |
Calbiochem, Merck, Feltham, UK |
219466 |
BSA |
Sigma-Aldrich, Merck |
A2153 |
MES sodium salt |
Fischer scientific (UK) |
71119-23-8 |
IPTG |
Fischer scientific (UK) |
50-121-7428 |
|
Critical Commercial Assays |
|
ELISA cGMP immunodetection |
Enzo Life Sciences LTD., Exeter, UK |
ADI-900-013 |
Cyclic Nucleotide Phosphodiesterase assay kit |
Enzo Life Sciences LTD., Exeter, UK |
BML-AK800-0001 |
|
Experimental Models: Organisms/Strains |
|
Arabidopsis seeds pde1-1 |
http://arabidopsis.info/ |
SALK_009905 |
Arabidopsis seeds pde1-2 |
http://arabidopsis.info/ |
SALK_104566 |
Arabidopsis seeds Columbia-0 |
Alistair Hetherington lab |
N/A |
Physcomitrella patens |
Jill Harrison’s lab [26] |
N/A |
uvr8-6 |
Favory et al. (2009) [25] |
N/A |
|
Oligonucleotides |
|
Pde1f |
This paper |
TGGAAATTGTGGAGCTTGCAG |
Pde1r |
This paper |
TCGTTAGTATCTTCGTCTTCTTGG |
act2qrtf |
This paper |
TTCCAGCAGATGTGGATCTC |
act2qrtr |
This paper |
TCTGTGAACGATTCCTGGAC |
pde1GstBamHI_F |
This paper |
AAAGGATCCATGGCGGCGAAGACGATGA |
pde1GstXhoI_R |
This paper |
AAACTCGAGTCAAGTTGACCCATCCCACT |
EF1alpha_F |
This paper |
TGTGCTGTTCTTATCATTGACTCC |
EF1alpha_R |
This paper |
TGGCATCCATCTTGTTACAACAG |
|
Recombinant DNA |
|
GST::CN-PDE1 |
EF1alpha_R |
This paper |
pGEX6P-1 vector |
(GE Healthcare, Amersham, UK) |
27-1542-01 |
|
Software and Algorithms |
|
SIMPLE PCI 6.1.2 |
https://www.hamamatsu.com/ |
N/A |
MXPro 3005 real time PCR system |
Agilent |
N/A |
Prism 6 |
GraphPad Software |
N/A |
HMMER3 suite |
[27] |
N/A |
|
Other |
|
LEDs 385nm |
Ushio Epitex inc., Kyoto, Japan |
L385R |
LEDs 470nm |
Farnell |
2414443 |
LEDs 660nm |
Farnell |
1142564 |
LEDs 735nm |
Ushio Epitex inc., Kyoto, Japan |
L735 |