Table 1.
Intronic and exonic circular RNA detected on the 7 testicular datasets.
Selected CR as coming from intronic circRNA | Validated Intronic CircRNAs | Name of animal | Dataset from testis | N. of reads available | N. of reads uniq. mapped on coding-protein transcripts | Validated exonic circRNAs | Selected CR as coming from exonic circRNAs |
---|---|---|---|---|---|---|---|
1.566 | 16 + 2 NC (1) | Animal-05 | Total-RNA-seq | 178.4 106 (2) | 109.7 106 | 1.663 | 40.281 |
6.159 | 118 + 3 NC (1) | Animal-31 | Total-RNA-seq | 146.1 106 (2) | 39.7 106 | 4.862 | 115.235 |
1.096 | 21 | Animal-54 | Total-RNA-seq | 173.2 106 (2) | 112.6 106 | 1.18 | 30,280 |
966 | 20 + 1 NC (1) | Animal-73 | Total-RNA-seq | 156.2 106 (2) | 94.5 106 | 1.075 | 28.166 |
898 | 19 | Animal-16 | Total-RNA-seq | 152.2 106 (2) | 101.0 106 | 1.01 | 26.663 |
645 | 16 | Animal-65 | Total-RNA-seq | 140.5 106 (2) | 82.9 106 | 671 | 18.251 |
1.185 | 15 | Animal-93 | Total-RNA-seq | 151.5 106 (2) | 100.5 106 | 1.084 | 27.121 |
<5 | Animal-05 | mRNA-seq | 23.86 106 (3) | 19.14 106 | 25 | ||
<5 | Animal-31 | mRNA-seq | 25.77 106 (3) | 20.73 106 | 36 |
(1) NC: non-conventional intronic circRNA or intron circle
(2) reads of 100 & 125 bp
(3) Reads of 150 bp