Table 1.
Differentially expressed transcript types. Absolute and relative numbers of transcripts differentially expressed in the crhRTR mutant compared to wild type in response to growth at 20 and 30°C (log2FC ≥1, adj. p -value ≤0.05).
|
crhRTR/WT (20°C) |
crhRTR/WT (30°C) |
|||||||
|---|---|---|---|---|---|---|---|---|
| Transcript type |
Increase | Decrease | Increase | Decrease | ||||
| mRNA | 34 | 40% | 50 | 60% | 38 | 46.3% | 44 | 53.7% |
| 5ʹ UTR-ncRNA | 23 | 92% | 2 | 8% | 17 | 77.3% | 5 | 22.7% |
| iRNA | 26 | 86.7% | 4 | 13.3% | 16 | 69.6% | 7 | 30.4% |
| asRNA | 48 | 96% | 2 | 4% | 22 | 95.7% | 1 | 4.3% |
| sRNA | 31 | 94% | 2 | 6% | 19 | 90.5% | 2 | 9.5% |
| Total | 162 | 73% | 60 | 27% | 112 | 65.5% | 59 | 34.5% |