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. 2019 Jul;7(14):309. doi: 10.21037/atm.2019.06.27

Table S1. Gene data.

Position Unigene GeneBank Symbol Description Gene name
A01 Hs.441047 NM_001124 ADM Adrenomedullin AM
A02 Hs.167046 NM_000676 ADORA2B Adenosine A2b receptor ADORA2
A03 Hs.513490 NM_000034 ALDOA Aldolase A, fructose-bisphosphate ALDA, GSD12, MGC10942, MGC17716, MGC17767
A04 Hs.9613 NM_001039667 ANGPTL4 Angiopoietin-like 4 ANGPTL2, ARP4, FIAF, HFARP, NL2, PGAR, pp1158
A05 Hs.508154 NM_181726 ANKRD37 Ankyrin repeat domain 37 Lrp2bp, MGC111507
A06 Hs.511605 NM_004039 ANXA2 Annexin A2 ANX2, ANX2L4, CAL1H, LIP2, LPC2, LPC2D, P36, PAP-IV
A07 Hs.73722 NM_080649 APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1 APE, APE1, APEN, APEX, APX, HAP1, REF1
A08 Hs.632446 NM_001668 ARNT Aryl hydrocarbon receptor nuclear translocator HIF-1-beta, HIF-1beta, HIF1-beta, HIF1B, HIF1BETA, TANGO, bHLHe2
A09 Hs.271791 NM_001184 ATR Ataxia telangiectasia and Rad3 related FRP1, MEC1, SCKL, SCKL1
A10 Hs.728782 NM_003670 BHLHE40 Basic helix-loop-helix family, member e40 BHLHB2, DEC1, FLJ99214, HLHB2, SHARP-2, STRA13, Stra14
A11 Hs.716515 NM_000057 BLM Bloom syndrome, RecQ helicase-like BS, MGC126616, MGC131618, MGC131620, RECQ2, RECQL2, RECQL3
A12 Hs.144873 NM_004052 BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 NIP3
B01 Hs.131226 NM_004331 BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like BNIP3a, NIX
B02 Hs.255935 NM_001731 BTG1 B-cell translocation gene 1, anti-proliferative
B03 Hs.63287 NM_001216 CA9 Carbonic anhydrase IX CAIX, MN
B04 Hs.13291 NM_004354 CCNG2 Cyclin G2
B05 Hs.491912 NM_006837 COPS5 COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis) CSN5, JAB1, MGC3149, MOV-34, SGN5
B06 Hs.517076 NM_000308 CTSA Cathepsin A GLB2, GSL, NGBE, PPCA, PPGB
B07 Hs.523012 NM_019058 DDIT4 DNA-damage-inducible transcript 4 Dig2, FLJ20500, REDD-1, REDD1, RP11-442H21.1, RTP801
B08 Hs.164419 NM_025219 DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 CSP, DKFZp434N1429, DKFZp761N1221, DNAJC5A, FLJ00118, FLJ13070
B09 Hs.511899 NM_001955 EDN1 Endothelin 1 ET1, HDLCQ7, PPET1
B10 Hs.444450 NM_022051 EGLN1 Egl nine homolog 1 (C. elegans) C1orf12, DKFZp761F179, ECYT3, HIFPH2, HPH2, PHD2, SM20, ZMYND6
B11 Hs.515417 NM_053046 EGLN2 Egl nine homolog 2 (C. elegans) DKFZp434E026, EIT6, FLJ95603, HIF-PH1, HIFPH1, HPH-1, HPH-3, PHD1
B12 Hs.326035 NM_001964 EGR1 Early growth response 1 AT225, G0S30, KROX-24, NGFI-A, TIS8, ZIF-268, ZNF225
C01 Hs.411641 NM_004095 EIF4EBP1 Eukaryotic translation initiation factor 4E binding protein 1 4E-BP1, 4EBP1, BP-1, MGC4316, PHAS-I
C02 Hs.517145 NM_001428 ENO1 Enolase 1, (alpha) ENO1L1, MPB1, NNE, PPH
C03 Hs.2303 NM_000799 EPO Erythropoietin EP, MGC138142, MVCD2
C04 Hs.592304 NM_014584 ERO1L ERO1-like (S. cerevisiae) ERO1-alpha, ERO1A
C05 Hs.361463 NM_000504 F10 Coagulation factor X FX, FXA
C06 Hs.62192 NM_001993 F3 Coagulation factor III (thromboplastin, tissue factor) CD142, FLJ17960, TF, TFA
C07 Hs.728789 NM_005252 FOS FBJ murine osteosarcoma viral oncogene homolog AP-1, C-FOS
C08 Hs.436062 NM_000158 GBE1 Glucan (1,4-alpha-), branching enzyme 1 GBE
C09 Hs.466471 NM_000175 GPI Glucose-6-phosphate isomerase AMF, DKFZp686C13233, GNPI, NLK, PGI, PHI, SA-36, SA36
C10 Hs.386225 NM_002103 GYS1 Glycogen synthase 1 (muscle) GSY, GYS
C11 Hs.597216 NM_001530 HIF1A Hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) HIF-1alpha, HIF1, HIF1-ALPHA, MOP1, PASD8, bHLHe78
C12 Hs.500788 NM_017902 HIF1AN Hypoxia inducible factor 1, alpha subunit inhibitor DKFZp762F1811, FIH1, FLJ20615, FLJ22027
D01 Hs.420830 NM_152794 HIF3A Hypoxia inducible factor 3, alpha subunit HIF-3A, IPAS, MOP7, PASD7, bHLHe17
D02 Hs.406266 NM_000189 HK2 Hexokinase 2 DKFZp686M1669, HKII, HXK2
D03 Hs.517581 NM_002133 HMOX1 Heme oxygenase (decycling) 1 HO-1, HSP32, bK286B10
D04 Hs.116462 NM_178849 HNF4A Hepatocyte nuclear factor 4, alpha FLJ39654, HNF4, HNF4a7, HNF4a8, HNF4a9, HNF4alpha, MODY, MODY1, NR2A1, NR2A21, TCF, TCF14
D05 Hs.591785 NM_003897 IER3 Immediate early response 3 DIF-2, DIF2, GLY96, IEX-1, IEX-1L, IEX1, PRG1
D06 Hs.450230 NM_000598 IGFBP3 Insulin-like growth factor binding protein 3 BP-53, IBP3
D07 Hs.514505 NM_015167 JMJD6 Jumonji domain containing 6 KIAA0585, PSR, PTDSR, PTDSR1
D08 Hs.2795 NM_005566 LDHA Lactate dehydrogenase A GSD11, LDH1, LDHM
D09 Hs.531081 NM_002306 LGALS3 Lectin, galactoside-binding, soluble, 3 CBP35, GAL3, GALBP, GALIG, L31, LGALS2, MAC2
D10 Hs.102267 NM_002317 LOX Lysyl oxidase MGC105112
D11 Hs.657756 NM_005921 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 MAPKKK1, MEKK, MEKK1
D12 Hs.132966 NM_000245 MET Met proto-oncogene (hepatocyte growth factor receptor) AUTS9, HGFR, RCCP2, c-Met
E01 Hs.407995 NM_002415 MIF Macrophage migration inhibitory factor (glycosylation-inhibiting factor) GIF, GLIF, MMIF
E02 Hs.297413 NM_004994 MMP9 Matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase) CLG4B, GELB, MANDP2, MMP-9
E03 Hs.501023 NM_005962 MXI1 MAX interactor 1 MAD2, MGC43220, MXD2, MXI, bHLHc11
E04 Hs.489615 NM_005746 NAMPT Nicotinamide phosphoribosyltransferase 1110035O14Rik, DKFZp666B131, MGC117256, PBEF, PBEF1, VF, VISFATIN
E05 Hs.596314 NM_003743 NCOA1 Nuclear receptor coactivator 1 F-SRC-1, KAT13A, MGC129719, MGC129720, RIP160, SRC1, bHLHe42, bHLHe74
E06 Hs.372914 NM_006096 NDRG1 N-myc downstream regulated 1 CAP43, CMT4D, DRG1, GC4, HMSNL, NDR1, NMSL, PROXY1, RIT42, RTP, TARG1, TDD5
E07 Hs.654408 NM_003998 NFKB1 Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 DKFZp686C01211, EBP-1, KBF1, MGC54151, NF-kappa-B, NF-kappaB, NFKB-p105, NFKB-p50, NFkappaB, p105, p50
E08 Hs.707978 NM_000603 NOS3 Nitric oxide synthase 3 (endothelial cell) ECNOS, eNOS
E09 Hs.467701 NM_002539 ODC1 Ornithine decarboxylase 1 ODC
E10 Hs.500047 NM_000917 P4HA1 Prolyl 4-hydroxylase, alpha polypeptide I P4HA
E11 Hs.464336 NM_000918 P4HB Prolyl 4-hydroxylase, beta polypeptide DSI, ERBA2L, GIT, P4Hbeta, PDI, PDIA1, PHDB, PO4DB, PO4HB, PROHB
E12 Hs.470633 NM_002610 PDK1 Pyruvate dehydrogenase kinase, isozyme 1
F01 Hs.445534 NM_002616 PER1 Period homolog 1 (Drosophila) MGC88021, PER, RIGUI, hPER
F02 Hs.195471 NM_004566 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 FLJ37326, IPFK2, PFK2
F03 Hs.476217 NM_004567 PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
F04 Hs.255093 NM_002626 PFKL Phosphofructokinase, liver DKFZp686G1648, DKFZp686L2097, FLJ30173, FLJ40909, PFK-B
F05 Hs.26010 NM_002627 PFKP Phosphofructokinase, platelet FLJ40226, FLJ44165, PFK-C, PFKF
F06 Hs.592599 NM_002629 PGAM1 Phosphoglycerate mutase 1 (brain) PGAM-B, PGAMA
F07 Hs.252820 NM_002632 PGF Placental growth factor D12S1900, PGFL, PLGF, PlGF-2, SHGC-10760
F08 Hs.78771 NM_000291 PGK1 Phosphoglycerate kinase 1 MGC117307, MGC142128, MGC8947, MIG10, PGKA
F09 Hs.81170 NM_002648 PIM1 Pim-1 oncogene PIM
F10 Hs.534770 NM_002654 PKM2 Pyruvate kinase, muscle CTHBP, MGC3932, OIP3, PK3, PKM, TCB, THBP1
F11 Hs.77274 NM_002658 PLAU Plasminogen activator, urokinase ATF, UPA, URK, u-PA
F12 Hs.479396 NM_005349 RBPJ Recombination signal binding protein for immunoglobulin kappa J region CBF1, IGKJRB, IGKJRB1, KBF2, MGC61669, RBP-J, RBPJK, RBPSUH, SUH, csl
G01 Hs.515846 NM_006666 RUVBL2 RuvB-like 2 (E. coli) ECP51, INO80J, REPTIN, RVB2, TIH2, TIP48, TIP49B
G02 Hs.414795 NM_000602 SERPINE1 Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 PAI, PAI-1, PAI1, PLANH1
G03 Hs.500761 NM_004207 SLC16A3 Solute carrier family 16, member 3 (monocarboxylic acid transporter 4) MCT 3, MCT 4, MCT-3, MCT-4, MCT3, MCT4, MGC138472, MGC138474
G04 Hs.473721 NM_006516 SLC2A1 Solute carrier family 2 (facilitated glucose transporter), member 1 DYT17, DYT18, GLUT, GLUT1, GLUT1DS, MGC141895, MGC141896, PED
G05 Hs.419240 NM_006931 SLC2A3 Solute carrier family 2 (facilitated glucose transporter), member 3 FLJ90380, GLUT3
G06 Hs.529618 NM_003234 TFRC Transferrin receptor (p90, CD71) CD71, TFR, TFR1, TRFR
G07 Hs.654481 NM_000546 TP53 Tumor protein p53 FLJ92943, LFS1, P53, TRP53
G08 Hs.524219 NM_000365 TPI1 Triosephosphate isomerase 1 MGC88108, TIM, TPI
G09 Hs.533977 NM_006472 TXNIP Thioredoxin interacting protein EST01027, HHCPA78, THIF, VDUP1
G10 Hs.454534 NM_003367 USF2 Upstream transcription factor 2, c-fos interacting FIP, bHLHb12
G11 Hs.519320 NM_003374 VDAC1 Voltage-dependent anion channel 1 MGC111064, PORIN, VDAC-1
G12 Hs.73793 NM_003376 VEGFA Vascular endothelial growth factor A MGC70609, MVCD1, VEGF, VPF
H01 Hs.520640 NM_001101 ACTB Actin, beta PS1TP5BP1
H02 Hs.534255 NM_004048 B2M Beta-2-microglobulin
H03 Hs.592355 NM_002046 GAPDH Glyceraldehyde-3-phosphate dehydrogenase G3PD, GAPD, MGC88685
H04 Hs.412707 NM_000194 HPRT1 Hypoxanthine phosphoribosyltransferase 1 HGPRT, HPRT
H05 Hs.546285 NM_001002 RPLP0 Ribosomal protein, large, P0 L10E, LP0, MGC111226, MGC88175, P0, PRLP0, RPP0
H06 N/A SA_00105 HGDC Human genomic DNA contamination HIGX1A
H07 N/A SA_00104 RTC Reverse transcription control RTC
H08 N/A SA_00104 RTC Reverse transcription control RTC
H09 N/A SA_00104 RTC Reverse transcription control RTC
H10 N/A SA_00103 PPC Positive PCR control PPC
H11 N/A SA_00103 PPC Positive PCR control PPC
H12 N/A SA_00103 PPC Positive PCR control PPC