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. 2019 Jul 24;20(15):3621. doi: 10.3390/ijms20153621

Table 1.

Patient’s clinical features grouped according to Neul classification, the pathogenic variants and the Next generation sequencing (NGS) approach.

Patient 1 2 3 4 5 6 7 8
Sex, Current Age (years) F (18 y) F (11 y) F (19 y) F (29 y) F (7y) F (9 y) F (38 y) F (42 y)
Molecular Approach NGS-pediatric epilepsy WES-RTT WES-RTT NGS -pediatric epilepsy NGS-diagnostic NGS-diagnostic NGS -pediatric epilepsy WES-RTT
Mutation/Inheritance Pattern STXBP1 NC_000009.11: g.130423471 C>T, NM_003165.3: c.416C>T: p.(Pro139Leu), de novo STXBP1 NC_000009.11: g.130435529 C>T, NM_003165.3: c.1099C>T: p.(Arg367Ter), de novo STXBP1 NC_000009.11: g.130416077 T>C, (NM_003165.3): c.169+2T>C, r.([169_170 ins [gc;169+3_169+1168]; 169_170ins [gc; 169+3_169+1334]]),p.(Ile57Serfs7*) de novo STXBP1 NC_000009.11: g.130428548 T>C, NM_003165.3: c.767T>C, p.(Leu256Pro), de novo STXBP1 NC_000009.11: g.130444840 G>A, (NM_003165.3) c.1702+1G>A, r. [1585_1702del117] p.(Glu530_Gly 568del) de novo STXBP1 NC_000009.11: g.130438188 C>T, NM_003165.3: c.1216 C>T, p.(Arg406Cys), de novo GABRG2 NC_000005.9: g.161576128_161576129 delinsGG, NM_000816.3: c.937_938 delinsGG, p.(Leu313Gly), de novo mosaic GABRB2 NC_000005.9: g.160758063 C>T, NM_021911.2: c.904G>A p.(Val302Met), de novo
Regression (age indicated) Followed by Recovery or Stabilization No cdv No cdv No cdv No cdv No Yes (6 months) Yes (12 months) Yes (9 months)
Main Criteria Partial or Complete Loss of Acquired Purposeful Hand Skills No: not lost, but NevAcq (grabs food and takes it to her mouth) No: not lost, but NevAcq (grasping and manipulation disturbed by involuntary movements) No: not lost, but NevAcq (grasping disturbed by tremors and stereotypies) No No: very limited hand skills No: not lost, but Nev completely Acq Yes: very limited hand skills Yes: (since 2 years leaves behind and drops things)
Partial or Complete loss of Acquired Spoken Language No: not lost, but NevAcq No: not lost, vocalisms and only ten words No: not lost, but NevAcq No: not lost, only a few words No: not lost, but Nev Acq, only vocalisms No: not lost, but NevAcq(vocalism) No: not lost, but NevAcq Yes (only “Mum” and “Dad”, then lost)
Gait Abnormalities: Impaired or Absence of Ability Yes (ataxic-dyspraxic, unstable and only for short distances: since 4 years) Yes (ataxic with axillary support: since 4 years) Yes absent (only standing with axillary support) Yes ataxic (walking with enlarged base and out of rotation of feet: since 3 years) Yes (walking with enlarged base/ not apraxic: since 3 years) Yes (Nev Acq) Yes (ataxic: since 6 years) Yes (apraxic, slow but autonomous, since 16 months, climbs the stairs)
Stereotypic Hand Movements (type) Yes frequent (brings her hands to mouth and bites fingers) Yes (not typical for RTT, beats her head: since 3 years) Yes (hand washing) Yes (hand rocking) Yes (hand washing, clapping, tapping right hand on table/books, tapping the forehead with the right upper limb, upper limb flickering) Yes (upper limbs tremors, upper limb flickering, and dyskinesias) Yes (tapping her right hand on her teeth: since 18 months), Yes (upper limbs flickering)
Exclusion Criteria Brain Injury: Peri or Postnatal Trauma, Neurometabolic Disease or Severe Infection No No No No No No No No
Grossly Abnormal Psychomotor Development in First 6 Months of Life: Exam at the Birth hypotonia normal normal hypotonia, hyperexcitability, inconsolable crying normal normal normal normal
Supportive Criteria Breathing Disturbances No Yes No No No No Yes (mild cyanosis and apneas) Yes (hyperventilation)
Bruxism when Awake No No Yes No Yes Yes Yes Yes (significant)
Impaired Sleep Pattern Yes (sleeplessness and nocturnal agitation) Yes (seizures) Yes (nocturnal bruxism) No Yes (several and prolonged nocturnal awakenings) No Yes No
Abnormal Muscle Tone Yes (proximal hypotonia) Yes Yes No No Yes (axial hypotonia, hypertonus of the limbs) Yes mild hypertonus (hypotonia in the first years of life) No
Peripheral Vasomotor Disturbances No No Yes No No No cold and bluish hands and feet without trophic changes No
Scoliosis/Kyphosis Yes (lumbar hyperlordosis) Yes (mild) Yes No No No Yes (mild kyphosis) No (only scoliotic attitude)
Growth Retardation No No No hypostaturism and obesity No Yes Yes mild No
Small Cold Hands/Feet Yes No Yes No (but short and stubby fingers) No Yes (small, not cold) Yes Yes (cold feet)
Inappropriate Laughing /Screaming Spells Yes No Yes (screams) No Yes nd Yes frequent Yes rare
Diminished Response to Pain Yes No No nd Yes nd nd No
Intense Eye Communication No Yes No No Yes No Yes Yes
Microcephaly: if Yes Indicate if Acquired Yes acquired No No No No Yes acquired No Yes acquired
Clinical Diagnosis at Referral RTT atypical RTT atypical Hanefeld RTT atypical congenital RTT-like-EOEE (West>Lennox-Gastaut) RTT atypical RTT-like (myoclonic epileptic encephalopathy) RTT atypical RTT classic

WES-RTT= Whole Exome Sequencing on Rett Syndrome; RTT = Rett Syndrome; NGS = Next generation Sequencing; WES = Whole Exome sequencing; cdv = Congenital Developmental Delay; nd = not done; Nev Acq = Never Acquired.