TABLE 1.
Motifs containing methylated bases m6A and m4C
| Motifa |
N. versiforme BOL5-4 |
N. pallidum BOL6-1 |
||
|---|---|---|---|---|
| % modified | Geneb | % modified | Geneb | |
| GACGAAC | 100 | FEJ81_15005 | ||
| CATTC | 100 | FEJ81_07280 | 99.9 | FGF80_04050 |
| CCWGG | 99.3 | FEJ81_16560 | ||
| GAACAYC | 100 | FEJ81_15230 | ||
| CTAG | 97.0 | FEJ81_09745 | 98.7 | FGF80_01935 |
| TCCTCGG | 96.0 | FEJ81_19855 | ||
| GCAAT | 71.4 | FEJ81_20490 | ||
| GTAYTCG | 98.8 | FGF80_00870 | ||
| CAGYAAC | 100 | FGF80_10950 | ||
a
Locations of methylated bases are in bold for the top strand and underlined for the bottom strand.
b
Putative assignments of MTases responsible for the modification in the first column based on sequence comparison with known enzymes of that specificity in REBASE.