Table 3.
ASD genome-wide association studies (GWAS) SNPs overlap with histone marks in brain dorsolateral prefrontal cortex, based on ENCODE and ROADMAP datasets.
| SNP | Chromatin marks | |||
|---|---|---|---|---|
| rs1080500 | H3K4me1 | H3K27ac | ||
| rs1104918 | H3K4me1 | H3K27ac | ||
| rs12045323 | H3K4me1 | H3K27ac | ||
| rs12826178 | H3K4me1 | |||
| rs133047 | H3K4me1 | |||
| rs1550976 | H3K4me1 | |||
| rs169738 | H3K4me3 | H3K4me1 | H3K27ac | |
| rs17292804 | H3K4me3 | H3K4me1 | H3K27ac | H3K9ac |
| rs2021722 | H3K4me1 | H3K27ac | H3K9ac | |
| rs2233375 | H3K27ac | |||
| rs2297909 | H3K4me1 | H3K27ac | H3K9ac | |
| rs2898883 | H3K27ac | H3K9ac | ||
| rs4150167 | H3K4me1 | H3K27ac | ||
| rs4702 | H3K4me3 | H3K4me1 | H3K27ac | H3K9ac |
| rs548181 | H3K4me3 | H3K4me1 | H3K27ac | H3K9ac |
| rs609412 | H3K4me1 | |||
| rs73416724 | H3K4me3 | H3K4me1 | H3K27ac | H3K9ac |
| rs760648 | H3K4me1 | |||
| rs8321 | H3K4me1 | H3K9ac | ||
| rs880446 | H3K4me3 | H3K4me1 | H3K27ac | H3K9ac |