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. Author manuscript; available in PMC: 2019 Sep 4.
Published in final edited form as: Environ Sci Technol. 2018 Aug 17;52(17):9562–9578. doi: 10.1021/acs.est.8b00967

Table 4.

Comparison of F&T mechanisms and nutrient species coverage for marine eutrophication models.

[(+) or (−) refers to an increase or decrease, respectively, in concentration of associated species in the water column]

Category Characteristic Model Name
AQUATOX-Estuary Cosme et al. NCOM-CGEM FVCOM-WQM FVCOM-GEM EFCD-WQM
Freshwater Nutrient Pools Nitrogen NH3, NO3, BN, DN, PON DIN, BN, DN NO3, NH4, BN, DN NH3/NH4, NO3, DN, BN NH4, NO3, NO2, DN NH3/NH4, NO3, DON, DN, BN
Phosphorus PO4, PIP, BP, DP, PON - PO4, BP, DP PO4, BP, DP PO4, DP PO4, DP, DOP, BP, PIP
Transport and Removal Mechanisms Advection N, P DIN N, P N, P N, P N, P
Diffusion N, P - N, P N, P N, P N, P
Biological Fixation BN (+) - - - - -
Sediment Exchange NO3 (+/−), NH3 (+/−),
PO4 (+/−)
- NH4 (+), PO4 (+) NO3 (+/−), NH3 (+/−),
PO4 (+/−)
NO3 (+/−), NH3 (+/−), PO4 (+/−) NO3 (+/−), NH3 (+/−), PO4 (+/−)
Active Vertical Transport BN (+/−), BP (+/−) BN (+/−) - BN, BP (+/−) BN (+/−), BP (+/−) -
Settling BN (−), BP (−), DN (−),
DP (−)
DN (−), BN (−) DN (−), DP (−) BN (−), BP (−), DN (−),
DP (−)
BN (−), BP (−),
DN (−), DP (−)
DP (−), DN (−), PIP (−), BN (−),
BP (−)
Resuspension DN (+), DP (+), PON (+), POP (+) - - NH4 (+), NO3 (+), PO4 (+) NH4 (+), NO3 (+), PO4 (+) DON (+), DP (+), DN (+), PIP (+), BN (+), BP (+)
Denitrification NO3 (−) DIN (−) NO3 (−) NO3 (−) NO3 (−) NO3 (−)
Nutrient Cycling Processes (within grid cells) Mineralization NH3 (+), PO4 (+), DN (−), DP (−), BN (−), BP (−) - DN (−), DP (−), NH4 (+), PO4 (+) NH4 (+), PO4 (+), DN (−), DP (−) NH4 (+), PO4 (+), DN (−), DP (−) DOP (−), PO4 (+), DON, (−),
NH4 (+)
Nitrification NO3 (+), NH3 (−), DO (−) - NH4 (−), NO3 (+), DO (−) NO3 (+), NH4 (−) NH4 (−), NO3 (+), DO (−) NH4 (−), NO3 (+), DO (−)
Dissolution/Hydrolysis - - - DN (−), DP (−) DN (−), DP (−) DN (−), DON (+), DP (−), DOP (+)
Decomposition, microbial DN (−), DP (−), NH3 (+), PO4 (+), DO (−) DN (−) - DN (−), DP (−) DN (−), DP (−) -
Mortality BN (−), BP (−), DN (+), DP (+) BN (−), DN (+) BN (−), BP (−), DN (+), DP (+) BN (−), BP (−), DN (+),
DP (+)
BN (−), BP (−),
DN (+), DP (+)
-
Biological Uptake NH3 (−), NO3 (−), PO4 (−), BN (+), BP (+), DO (+) DIN (−), BN (+) NH4 (−), NO3 (−), PO4 (−), BN (+), BP (+), DO (+) NH4 (−), PO4 (−), NO3 (−), BN (+), BP (+), DO (+) NH4 (−), PO4 (−), NO3 (−), BN (+), BP (+) PO4 (−), NH4 (−), NO3 (−), BN (+), BP (+), DO (+)
Predation/Ingestion DN (−), DP (−), BN (+/−), BP (+/−) BN (+/−) BN (+/−), BP (+/−), DN (+), DP (+) BN (+/−), BP (+/−), DN (+), DP (+) BN (+/−), BP (+/−), DN (+), DP (+) DOP (+), DP (+), PO4 (+), DON (+), DN (+), NH4 (+), BN (−), BP (−)
Colonization DN (−), DP (−), NH3 (+), PO4 (+) - - - - -
Adsorption PIP (+), PO4 (−) - - - - PO4 (−), PIP (+)
Respiration/metabolism NH3 (+), PO4 (+), BN (−), BP (−), DO (−) DN (−) NH4 (+), PO4 (+), BN (−), BP (−),
DO (−)
NH4 (+), PO4 (+), BN (−), BP (−), DO (−) NH4 (+), PO4 (+), BN (−), BP (−) DOP (+), POP (+), PO4 (+),
DON (+), PON (+), NH4 (+),
BN (−), BP (−), DO (−)
Excretion NH3 (+), BN (−), BP (−), DN (+), DP (+), PO4 (+) BN (−), DN (+) NH4 (+), PO4 (+), DN (+), DP (+) - - DOP (+), POP (+), PO4 (+),
DON (+), PON (+), NH4 (+),
BN (−), BP (−)
Reaeration DO (+) - DO (+) DO (+) - DO (+)
Sediment Demand DO (−) DO (−) DO (−) DO (−) - DO (−)
1

P - phosphorus, N - nitrogen, DON - dissolved organic nitrogen, ON - organic nitrogen, OP - organic phosphorus, DIP - dissolved inorganic phosphorus, DOP - dissolved organic phosphorus, POP - particulate organic phosphorus, PON - particulate organic nitrogen, NO3 - nitrate, NH4 - ammonium, NH3 - ammonia, PO4 - phosphate, BN - biological nitrogen, BP - biological P, OM - organic matter, DN - detrital N, DP -detrital P, PIP - particulate inorganic phosphorus