Table 2.
gene | phenotype | subjects | country | first author | journal | year | reference No. | |||
---|---|---|---|---|---|---|---|---|---|---|
1 | VDR | lumbar disc degeneration, signal intensity, disc narrowing, bulging | 85 pairs of male monozygotic twin | Finland | Videman T | Spine | 1998 | p | 28 | |
2 | VDR | osteophytosis, disc space narrwoing | 110 men, 172 women >60 years | Australia | Jones G | Ann Rheum Dis | 1998 | p | 29 | |
3 | AGC | lumbar disc degeneration | 64 young adults | Japan | Kawaguchi Y | Spine | 1999 | p | 30 | * |
4 | COL9A2 | intervertebral disc disease | 154 Trp2 (+), 174 controls | Finland | Annunen S | Science | 1999 | p | 31 | |
5 | COL9A2 | disc prolapse | 3 Trp2 (+), 247 other patients | Germany | Wrocklage C | Biochem Biophys Res Commun | 2000 | p | 32 | |
6 | VDR | lumbar disc degeneration, signal intensity, disc narrowing, bulging, annular tear, herniations, osteophytes | 142 men | Finland | Videman T | Spine | 2001 | p | 33 | |
7 | MMP-3 | lumbar disc degeneration | 54 young, 49 elderly Japanese | Japan | Takahashi M | J Bone Joint Surg Br | 2001 | p | 34 | |
8 | COL9A3 | lumbar disc disease | 171 with LDD, 321 controls | Finland | Paassilta P | JAMA | 2001 | p | 35 | |
9 | VDR | lumbar disc degeneration | 205 young adults | Japan | Kawaguchi Y | J Bone Joint Surg Am | 2002 | p | 36 | * |
10 | COL9A3 | lumbar disc degeneration | 135 middle aged men | Finland | Solovieva S | Spine | 2002 | p | 37 | |
11 | COL9A2 | MRI findings | 159 patients with sciatica | Finland | Karppinen J | Spine | 2002 | p | 38 | |
12 | COL9A2, COL11A2 | disc herniation or disc degeneration | 29 Finnish probands, 56 Finnish controls | Finland | Noponen-Hietala N | Ann Rheum Dis | 2003 | p | 39 | |
13 | COL1A1 | inetrevertebral disc degeneration | 966 men and women ≥65 years | Holland | Plujim SM | Ann Rheum Dis | 2004 | p | 40 | |
14 | IL-1 | disc degeneration | 133 middle-aged men | Finland | Solovieva S | Epidemiology | 2004 | p | 41 | |
15 | COL9 | lumbar surgery | 107 patients who underwent lumbar surgery | US | Matsui Y | J Bone Joint Surg Br | 2004 | p | 42 | |
16 | CILP | lumbar disc herniation | 467 patients, 654 controls | Japan | Seki S | Nat Genet | 2005 | p | 43 | *, § |
17 | MMP-3, TIMP, COX2, VDR, THBS2 | osteophyte, K-L grade, osteophyte, radiographic progression of lumbar spine disc degeneration | 720 women | UK | Valdes AM | Spine | 2005 | p | 44 | |
18 | COL9A3, COL11A2, IL-1B | dark nuclues pulposus, disc bulge | 135 middle aged ocuppationally active men | Finland | Solovieva S | Eur Spine J | 2006 | p | 45 | |
19 | VDR | lumbar disc degeneration | 804 Southern Chinese Volunteers | China | Cheung K | Spine | 2006 | p | 46 | |
20 | COL9A2 | lumbar disc herniation | 470 patients with lumbar disc degeneration, 658 controls | Japan | Seki S | J Hum Genet | 2006 | p | 47 | * |
21 | COL9A2 | severe disc degeneration in patients with lumbar disc herniation | 84 patients having discectomy | Japan | Higashino K | Int Orthop | 2007 | p | 48 | |
22 | ADH2 | disc degeneration, osteophyte formation | 387 elderly persons | Japan | Sakai Y | Spine | 2007 | p | 49 | |
23 | AGC | dark nucleus pulposus | 132 men | Finland | Solovieva S | Spine | 2007 | p | 50 | |
24 | MMP-2 | lumbar disc disease | 162 younger patients with LDD, 318 healthy adults | China | Dong DM | Eur Spine J | 2007 | p | 51 | |
25 | COL11A1 | lumbar disc herniation | 334 cases, 376 controls | Japan | Mio F | Am J Hum Genet | 2007 | p | 52 | * |
26 | CILP | lumbar disc herniation | 243 Finnish patients with symptoms of LDD and 259 controls, and in 348 Chinese subjects with MRI-defined LDD and 343 controls. | Finland, China | Virtanen I | J Med Genet | 2007 | n | 53 | |
27 | THBS2 | lumbar disc herniation | 847 cases, 896 control | Japan | Hirose Y | Am J Hum Genet | 2008 | p | 54 | * |
28 | ASPN | lumbar disc degeneration | Chinese: 1054 cases, 1056 controls; Japanese: 1490 cases, 1216 controls | China, Japan | Song YQ | Am J Hum Genet | 2008 | p | 55 | *, § |
29 | IL-1, MMP-3 | type II Modic change | 228 subjects, 128 Modic change | Finland | Karppinen J | Spine | 2008 | p | 56 | |
30 | Multi-genes, AGC, COL1A1, COL9A1, COL11A1, IL18RAP | disc signal intensity, bulging, height narrowing | 588 men | Finland | Videman T | Arthritis Rheum | 2009 | p | 57 | |
31 | MMP-9 | lumbar disc degeneration | 408 young patients with LDD, 451 control subjects, Northern Chinese | China | Sun ZM | Conect Tissue Res | 2009 | p | 58 | |
32 | CILP | lumbar disc degeneration | 89 Japanese Judo athletes | Japan | Min SK | Int J Sports Med | 2009 | p | 59 | |
33 | KIAA1217 | lumbar disc herniation, lumbar disc disease | Japanese A: 1050 cases & 1128 controls, Japanese B 674 caes & 664 controls, Finnish 514 cases & 498 controls | Japan and Finland | Karasugi T | J Bone Miner Res | 2009 | p | 60 | *, § |
34 | MMP-3, VDR+physical loading | lumbar disc degeneration | 178 LBP with lumbar disc degeneration, 284 controls | China | Yuan HY | J Occup Health | 2010 | p | 61 | |
35 | IL-1A, IL-6 | girl lumbar disc degenerative disease | 30 boys+36 girls with LDD, 73 boys+81 girls without MRI change, Danish | Finland | Eskola PJ | Int J Mol Epidemiol Genet | 2010 | p | 62 | |
36 | VDR, AGC | disc degeneration and herniation | 300 individual | Turkey | Eser B | Genet Test Mol Biomarkers | 2010 | p | 63 | |
37 | AGC | symptomatic lumbar disc herniation | 70 patients vs 14 trauma+113 healthy control, Chinese Han | China | Cong L | Spine | 2010 | p | 64 | |
38 | AGC | lumbar disk degeneration disease | 71 patients vs 108 healthy individuals | Iran | Mashayekhi F | Biochem Genet | 2010 | p | 65 | |
39 | IL-1RN | clinical course of lumbar herniated nucleus pulposus | 54 lumbar LDH, 227 healthy adult controls | USA | Kim DH | Spine | 2010 | p | 66 | |
40 | CILP | lumbar disc degeneration | 610 collegiate athletes | Japan | Min SK | Am J Sports Med | 2010 | p | 67 | |
41 | GCH1 | surgical treatment success of lumbar degenerative disc disease | 69 patients with LDD | USA | Kim DH | Spine | 2010 | p | 68 | |
42 | COMT | surgical treatment success of degenerative disc disease | 69 surgical treatment | USA | Dai F | Spine J | 2010 | p | 69 | |
43 | HAPLN1 | spinal degeneration | 622 postmenopausal women | Japan | Urano T | Eur Spine J | 2011 | p | 70 | |
44 | Caspase 9 | lumbar disc herniation, disc degeneration | 387 LDH, 412 control subjects, Northern Chinese | China | Sun ZM | Conect Tissue Res | 2011 | p | 71 | |
45 | GDF5 | lumbar disc disease | 5 population cohort, 1463 northern European women | UK | Williams FM | Arthritis Rheum | 2011 | p | 72 | |
46 | FAS, FASL | lumbar disc disease | 348 LDD, 215 healthy control, Chinese Han | China | Zhu GB | Biomarkers | 2011 | p | 73 | |
47 | IL-10 | lumbar disc degeneration+lumbar disc herniation | 320 LDD, 268 control, 134 LDH (messenger RNA analysis), Chinese Han | China | Lin WP | Genet Mol Res | 2011 | p | 74 | |
48 | AGC | lumbar degenerative disc disease | 100 20-30 years old patients with or without LBP | Turkey | Eser O | Genet Mol Res | 2011 | p | 75 | |
49 | IL-6, SKT, CILP | lumbar disc degeneration | 538 young adults | Finland | Kelempisioti A | BMC Med Genet | 2011 | p | 76 | |
50 | BCL-2 | lumbar disc degeneration | 325 LDD, 236 normal controls, Chinese Han | China | Shang XP | Clin Lab | 2012 | p | 77 | |
51 | COMT | pain after treatment for low back pain | 60 lumbar fusion, 33 cognitive therapy and exercise | Norway | Omair A | BMC Musculoskeletal Disord | 2012 | p | 78 | |
52 | DR4 | lumbar disc degeneration | 296 LDD, 208 healthy controls, Chinese Han | China | Tan H | Scand J Clin Lab Invest | 2012 | p | 79 | |
53 | PARK2 | lumbar disc degeneration | 4600 individuals, Northern European | HK | Williams FM | Ann Rheum Dis | 2013 | p | 80 | |
54 | FAS ligand | lumbar disc herniation | 475 patienst with LDH, 533 controls, Northern Chinese | China | Sun Z | Conect Tissue Res | 2013 | p | 81 | |
55 | MMP-12 | low back pain, sciatica, disability | 260 patients with LDH | Norway | Jacobsen LM | Clin J Pain | 2013 | p | 82 | |
56 | IL-18RAP, IL-18R1, IL-A, MMP-3 | severe degeneration, pain, disability | 93 patients with chronic LBP | Norway | Omair A | BMC Musculoskeletal Disord | 2013 | p | 83 | |
57 | CASP-9 positive, IL-1B negative | low back pain | 305 case, 587 control, Chinese soldier | China | Mu J | J Neurosurg, Spine | 2013 | p | 84 | |
58 | multi genes, 58 candidate gene, at least 11 genes were positive | degenerative disc disease, annular tear, disc dgeneration, endplate damage | 342 subjects | Indian | Rajasekaran S | Spine J | 2013 | p | 85 | |
59 | MMP-2 | lumbar disc degeneration | 1008 LDD, 906 controls | China | Zhang Y | Eur Rev Pharmacol Sci | 2013 | p | 86 | |
60 | VEGF positive, eNOS negative | lumbar disc degeneration | 102 LDD, 139 controls | Korea | Han IB | Genet Mol Res | 2013 | p | 87 | |
61 | HIF-1α | lumbar disc degeneration | 320 LDD, 447 controls | Egypt | Lin WP | PLoSOne | 2013 | p | 88 | |
62 | CHST3 | lumbar disc degeneration | 4043 LDD, 28599 normal subjects | Japan, China, Finland | Song YQ | J Clin Invest | 2013 | p | 89 | *, § |
63 | MMP-3, VDR+occupation | lumbar disc degeneration | 84 LDD, 60 controls, Egyptian | Egypt | Zawilla NH | J Occup Rehabil | 2014 | p | 90 | |
64 | CILP, ASPN | lumbar disc degeneration, only male positive | 516 Japanese collegiate athlethes | Japan | Min SK | Cartilage | 2014 | p | 91 | |
65 | ADAMTS-5 | lumbar disc degeneration | 50 participants | Chinese Han | Wu N | J Orthop Res | 2014 | p | 92 | |
66 | VDR | lumbar spinal disorders | 267 spinal disorders, 220 asymptomatic controls | Italian | Colombini A | PLoSOne | 2014 | p | 93 | |
67 | VDR | lumbar disc degeneration | 121 LDD, 131 healthy controls | Brasil | Vieira LA | Genet Test Mol Biomarkers | 2014 | p | 94 | |
68 | ADIPOQ | lumbar disc degeneration | 168 LDD, 122 healthy individuals | Jordan | Khabour OF | Ext Ther Med | 2014 | p | 95 | |
69 | AGC+obesity | lumbar disc herniation | 61 LDH, 198 healthy | China | Cong L | Conect Tissue Res | 2014 | p | 96 | |
70 | IL-1A, VDR | lumbar disc degeneration | 100 LDD, 100 normal MRI | Mexico | Cervin Serrano S | Int J Genomics | 2014 | n | 97 | |
71 | GDF5 | symptomatic lumbar disc herniation | 231 patients, 370 controls | China | Mu J | Eur Spine J | 2014 | p | 98 | |
72 | multigene, COL11A1, ADAMTS5, CALM1, IL-1F5, COX2 | total disc degenerative score | 308 mild TDD, 387 severe TDD | Indian | Rajasekaran S | Eur Spine J | 2015 | p | 99 | |
73 | TRAIL | lumbar disc degeneration | 312 LDD, 196 healthy controls, Chinese Han | China | Zhang C | Genet Test Mol Biomarkers | 2015 | n | 100 | |
74 | TRAIL | lumbar disc degeneration | 153 LDD, 131 healthy subjects, Chinese Han | China | Du H | Int J Clin Exp Pathol | 2015 | p | 101 | |
75 | COL1A1, COL9A3, VDR multiple mutation | lumbar disc degeneration | 75 severe LDD, 25 healthy control, Southern European ancestry | Greece | Toktas ZO | Eur Spine J | 2015 | p | 102 | |
76 | VDR | lumbar disc herniation | 110 LDH, 110 healthy control | Italian | Sansoni V | Eur Spine J | 2016 | p | 103 | |
77 | IL-18RAP, MMP-9 | adjacent disc space narrowing, greater disc space height | 208 fusion, 77 non-operative treatment | Norway | Omair A | Eur Spine J | 2016 | p | 104 | |
78 | ADAMTS-4 | lumbar disc degeneration | 482 LDD, 496 healthy controls, Chinese Han | China | Liu S | J Orthop Res | 2016 | p | 105 | |
79 | MMP-3 | lumbar disc herniation | 100 patients with LDH | Turkey | Eser B | Genet Mol Res | 2016 | p | 106 | |
Review and meta-analysis papers | ||||||||||
1 | COL9A2, COL9A3, review | lumbar disc herniation, lumbar disc degeneration | US | Ala-Kokko L | Ann Med | 2002 | 107 | |||
2 | VDR, COL9A2, COL9A3, AGC, COL1A1, MMP-3, CILP, IL-1 | lumbar disc degeneration | China | Chan D | Eur Spine J | 2006 | 108 | |||
3 | COL1A1, COL9A2, COL9A3, COL11A2, IL-1, IL-6, VDR, AGC, MMP-3, CILP, TIMP, COX2, THBS2 | lumbar disc degeneration | US | Kalichman L | Joint Bone Spine | 2008 | 109 | |||
4 | COL9A2, COL9A3, COL1A1, VDR, MMP-3, IL-1 | degenerative disc disease | China | Zhang Y | Int J Biol Sci | 2008 | 110 | |||
5 | GDF5, ASPN review | lumbar disc disease, osteoarthritis | UK | Loughlin J | Arthritis Res Ther | 2011 | 111 | |||
6 | COL1A1, COL9A2, COL9A3, COL11A2, IL-1, IL-6, VDR, AGC, MMP-3, THBS22 | lumbar disc degeneration | US, Mexico | Kalb S | World Neurosurgery | 2012 | 112 | |||
7 | VDR review | lumbar disc degeneration, osteoarthritis | Italiy | Colombini A | J Steoroid Biochem Mol Biol | 2013 | 113 | |||
8 | AGC, meta-analysis | lumbar disc degeneration | 965 LDD, 982 normal controls | China | Gu J | Spine | 2013 | 114 | ||
9 | ASPN review | degenerative disc disease | Japan | Ikegawa | Annu Rev Genomics Hum Genet | 2013 | 115 | |||
10 | COL9, COL11 review | lumbar disc disease | Poland | Janeczko Ł | Neurol Neurochir Pol | 2014 | 116 | |||
11 | COL9A2, meta-analysis | lumbar disc diesase | 1522 LDD, 1646 controls | China | Zhang Z | Spine | 2014 | 117 |
VDR: Vitamin D receptor
AGC: Aggrecan
MMP: Matrix metalloproteinase
COL: Collagen
IL: Interleukin
ADH2: Alcohol dehydrogenase 2
ASPN: Asporin
IL18 RAP: Interleukin 18 receptor accessory protein
GCH1: guanosine triphosphate cyclohydrolase 1 gene
COMT: Catechol-O-methyl transferase
HAPLN1: the hyaluronan and proteoglycan link protein 1
CHTS3: carbohydrate sulfatransferase 3
ADAMTS: A disintegrin and metalloproteinase with thrombospondin motifs
TRAIL: Tumor necrosis factor-related apoptosis-induced ligand
DR4: Death Recetor 4
ADIPOQ, adiponectin
Trp: the tryptophan allele
LDD: lumbar disc disease
LBP: low back pain
LDH: lumbar disc heniation
TDD: total disc degeneration
p: postive results
n: negative results
*: authors related work
§: high association