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. 2019 Jun 20;146(10):1275–1283. doi: 10.1017/S0031182019000581

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© Cambridge University Press 2019

This is an Open Access article, distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike licence (http://creativecommons.org/licenses/by-nc-sa/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the same Creative Commons licence is included and the original work is properly cited. The written permission of Cambridge University Press must be obtained for commercial re-use.

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Fig. 3. — The haplotype composition of each specimen genotyped in this study represented as a barcode. The 88 specimens in the study cohort were assigned to 16 distinct clusters by the ensemble, with cluster assignments shown on the right hand side of each panel. These cluster assignments were made based on the haplotype composition of each sample, with the loci and their respective haplotype numbers shown along the two top rows. Boxes are shaded black if the corresponding haplotype was detected in a specimen. Specimen names are listed in the far left column of each panel. Rows are shaded grey if sequencing was unsuccessful for a given marker. This figure was generated to graphically represent the groupings assigned by the ensemble when presented with a set of complex genotyping data.