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. 2019 Aug 13;10:1896. doi: 10.3389/fmicb.2019.01896

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Copyright © 2019 Gan, Szegedi, Fersi, Chebil, Kovács, Kawaguchi, Hudson, Burr and Savka.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Co-occurrence network of ASV sequences from 73 crown gall samples. Strong (–0.5 < R < 0.5) and significant (p-value < 0.001) co-occurrences between ASVs are displayed by lines connecting the nodes. The line thickness reflects the strength of the correlation while the color reflects positive (green) or negative (red) associations. Each node represents one ASV and was colored based on RDP naïve Bayesian taxonomic classification to the family level. The size of each node reflects the average percentage relative abundance of the ASV they represent. Conf., confidence score of RDP taxonomic assignment; ARA, average relative abundance.