Antibodies |
|
Custom made secondary antibodies (rabbit & mouse) |
MRC Phosphorylation and Ubiquitylation unit, University of Dundee |
N/A |
α-Acetyl lysine |
Cytoskeleton |
Cat#AAC03 |
α-Alpha tubulin |
Santa-Cruz |
Cat#sc-8035 |
α-ANXA1 |
Sigma |
Cat#HPA011272 |
α-Beta actin |
Sigma |
Cat#A5441 |
α-OXPHOS |
Abcam |
Cat#ab110413 |
α-PGK1 |
Abcam |
Cat#ab199438 |
α-PGM1 |
Protein Tech |
Cat#15161-1-AP |
α-PKM1 |
Protein Tech |
Cat#15821-1-AP |
|
Chemicals, Peptides, and Recombinant Proteins |
|
13C labeled nucleotides, nucleosides |
Trammell and Brenner, 2013 |
N/A |
18O- nicotinamide |
Kolodziejska-Huben et al., 2002 |
N/A |
18O nicotinamide riboside |
Yang et al., 2007 |
N/A |
2-mercaptoethanol |
VWR |
Cat#441435C |
Acetonitrile, Optima LC/MS |
Fisher Scientific |
Cat#A955-4 |
Adenosine 5′-triphosphate disodium salt hydrate |
Sigma-Aldrich |
Cat#A2383 |
Adenosine 5′diphosphate |
Sigma-Aldrich |
Cat#A5285 |
Adenosine diphosphate |
Sigma-Aldrich |
Cat#1905 |
Adenosine monophosphate |
Sigma-Aldrich |
Cat#A2252 |
ADPR |
Sigma-Aldrich |
Cat#A0752 |
Ammonium acetate |
Sigma-Aldrich |
Cat#238074 |
Antimycin A |
Sigma-Aldrich |
Cat#A8674 |
Benazmidine |
Millipore |
Cat#S7124222 |
Bovine serum albumin |
Sigma |
Cat#A2153 |
BSA, essentially fatty acid free |
Sigma-Aldrich |
Cat#A6003 |
Calcium carbonate |
Sigma-Aldrich |
Cat#C4830 |
Catalase from bovine liver |
Sigma-Aldrich |
Cat#C9322 |
Chemiluminescent HRP substrate |
Millipore |
Cat#WBKLS0500 |
Cytidine |
Sigma-Aldrich |
Cat#C122106 |
Cytochrome c
|
Sigma-Aldrich |
Cat#C7752 |
d3, 18O methyl nicotinamide |
Trammell et al., 2016a |
N/A |
d4-nicotinic acid |
CDN isotopes |
Cat#D-4368 |
Dithiotreitol |
Sigma-Aldrich |
Cat#D0632 |
DL-octanoyl carnitine-HCl |
Tocris bioscience |
Cat#605 |
Dnase I, Rnase-free |
Thermo Scientific |
Cat#EN0521 |
EDTA |
Sigma |
Cat#E1644 |
EGTA |
Sigma-Aldrich |
Cat#E4378 |
EGTA |
Sigma |
Cat#E4378 |
FCCP |
Sigma-Aldrich |
Cat#2920 |
Glucose reagent |
Werfen Ltd |
Cat#00018250740 |
Glutamic acid monosodium salt hydrate |
Sigma-Aldrich |
Cat#G1626 |
Glycerol reagent |
Randox |
Cat#GY105 |
Glycine |
VWR |
Cat#0167 |
HEPES |
Fluka |
Cat#BP310-1 |
Imidazole |
Sigma-Aldrich |
Cat#56750 |
Inosine |
Sigma-Aldrich |
Cat#I4125 |
Inosine monophosphate |
Sigma-Aldrich |
Cat#57510 |
Lactate Reagent |
Randox |
Cat#LC2389 |
Lactobionic acid |
Sigma-Aldrich |
Cat#153516 |
LDS sample buffer |
Invitrogen |
Cat#NP0008 |
Magnesium chloride hexahydrate |
Sigma-Aldrich |
Cat#M2670 |
Malic acid |
Sigma-Aldrich |
Cat#M1000 |
MES Free Acid Hydrate |
Sigma-Aldrich |
Cat#M8250 |
N1-methyl-2-pyridone-5-carboxamide |
TLC Pharmaceutical Standards |
Cat#N-0621 |
N1-methyl-4-pyridone-3-carboxamide |
TLC Pharmaceutical Standards |
Cat#N-0627 |
NAAD |
Sigma-Aldrich |
Cat#N4256 |
NAD |
Sigma-Aldrich |
Cat#N0632 |
NADP |
Sigma-Aldrich |
Cat#N5755 |
NAR |
gift |
N/A |
N-d3 methyl −4 pyridone-3-carboxamide |
TLC Pharmaceutical Standards |
Cat#N-0628 |
NEFA reagent |
Randox |
Cat#FA115 |
Nicotinamide |
Sigma-Aldrich |
Cat#72340 |
nicotinamide N-oxide |
Sigma-Aldrich |
Cat#N3258 |
Nicotinamide riboside |
ChromaDex |
Cat#ASB-00014315 |
Nicotinic acid |
Sigma-Aldrich |
Cat#N4126 |
N-methyl nicotinamide |
Cayman Chemical |
Cat#16604 |
NMN |
Sigma-Aldrich |
Cat#N3501 |
Phosphocreatine disodium salt hydrate |
Sigma-Aldrich |
Cat#P7936 |
Potassium phosphate monobasic |
Sigma-Aldrich |
Cat#P9791 |
Protease inhibitor cocktail |
Roche |
Cat#11873580001 |
Rotenone |
Sigma-Aldrich |
Cat#R8875 |
Saponin from Quillaja bark |
Sigma-Aldrich |
Cat#S7900 |
SDS |
ITW |
Cat#A1112 |
Skimmed milk powder |
Cell Signaling |
Cat#9999 |
Sodium chloride |
VWR |
Cat#27800.360 |
Sodium fluoride |
Alfa Aesar |
Cat#7681-49-4 |
Sodium orthovanodate |
Aldrich |
Cat#450243 |
Sodium pyrophosphate |
Sigma |
Cat#221368 |
Sodium succinate dibasic hexahydrate |
Sigma-Aldrich |
Cat#S2378 |
Sucrose |
Sigma-Aldrich |
Cat#S9378 |
Sucrose |
VWR |
Cat#0335 |
Taurine |
Sigma-Aldrich |
Cat#T8691 |
TRI Reagent |
Sigma-Aldrich |
Cat#T9414 |
Triglyceride reagent |
Werfen Ltd |
Cat#00018258740 |
Tris-base |
Fisher |
Cat#BP152 |
Tris-HCL |
Fisher |
Cat#BP153 |
Triton X-100 |
Sigma |
Cat#101634725 |
Tween-20 |
VWR |
Cat#0777 |
U-13C6 glucose |
Cambridge Isotope |
Cat#CLM-1396-pk |
Water, Optima LC/MS |
Fisher Scientific |
Cat#W6-4 |
β-Glycerophosphate |
Sigma |
Cat#G9422 |
|
Critical Commercial Assays |
|
Citrate synthase assay kit |
Sigma-Aldrich |
Cat#CS0720 |
Coomassie protein assay reagent |
Thermo Fisher |
Cat#1856209 |
Insulin assay |
Mercodia |
Cat#10-1113-01 |
|
Deposited Data |
|
Raw and processed data files for RNA sequencing |
This paper |
GEO: GSE133261
|
|
Oligonucleotides |
|
Please refer to Table S6
|
This paper |
N/A |
|
Other |
|
Precast gels |
BioRad |
Cat#5671084 |
Thermo hypercarb 2.1 × 100 mm column, 3μm |
Fisher |
Cat#35003-102130 |