Antibodies |
Dylight 649 anti-mouse |
Jackson ImmunoResearch Laboratories |
715–495-151 |
Cy3 anti-rabbit |
Jackson ImmunoResearch Laboratories |
111–165-144 |
Cy3 anti-mouse |
Jackson ImmunoResearch Laboratories |
715–165-151 |
Cy5 anti-rabbit |
Jackson ImmunoResearch Laboratories |
711–175-152 |
mouse monoclonal anti-CENP-A |
Enzo Life Sciences |
ADI-KAM-CC006-E |
rabbit anti-CENP-C |
[49] |
N/A |
mouse monoclonal anti-MAD2 |
Santa Cruz Biotechnology |
sc-65492 |
rabbit anti-CENP-L |
[23] |
N/A |
Chemicals, Peptides, and Recombinant Proteins |
CF1.2/1.3 holey carbon grids |
EMS |
CFT413–50 |
Uranyl acetate |
EMS |
22400 |
STLC |
Sigma |
164739 |
VectaShield |
Vector Laboratories |
H-1000 |
mineral oil |
Sigma |
M531 |
RO-3306 |
Enzo Life Sciences |
ALX-270–463 |
BS3 |
Thermo Fisher Scientific |
21580 |
Trypsin |
Promega corporation |
V5111 |
Glutaraldehyde |
Sigma |
G5882–10x |
Iodoacetamide |
Sigma |
I1149–5G |
Deposited Data |
CENP-A nucleosome bound by two copies of CENP-CCD and two copies CENP-NNT
|
This paper |
EMDB:9251 |
CENP-A nucleosome bound by two copies of CENP-CCD and one copy CENP-NNT
|
This paper |
EMDB:9250 |
CENP-A nucleosome bound by two copies of CENP-CCD and two copies CENP-NNT with local refinement |
This paper |
EMDB:92523 |
Model of CENP-A nucleosome bound by two copies of CENP-CCD and two copies CENP-NNT
|
This paper |
PDB:6MUP |
Model of CENP-A nucleosome bound by two copies of CENP-CCD and two copies CENP-NNT
|
This paper |
PDB:6MUO |
CCNC BS3 crosslink Mass spectrometry proteomics data |
This paper |
PXD12605 and 10.6019/PXD12605
|
Experimental Models: Cell Lines |
DLD-1 Flp-In T-Rex |
[48] |
N/A |
DLD-1 CENP-NAID-EGFP/AID-EGFP |
[23] |
N/A |
Software and Algorithms |
COOT |
[61] |
http://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot |
PHENIX |
[60] |
https://www.phenix-online.org |
PyMOL |
[64] |
http://www.pymol.org |
MotionCor2 |
[56] |
http://msg.ucsf.edu/em/software/motioncor2.html |
Gctf |
[57] |
https://www.mrc-lmb.cam.ac.uk/kzhang/Gctf/ |
Monores |
[59] |
https://www.ncbi.nlm.nih.gov/pubmed/29395788 |
RELION |
[58] |
http://www2.mrc-lmb.cam.ac.uk/relion/index.php/Main_Page |
UCSF Chimera |
[62] |
https://www.cgl.ucsf.edu/chimera/ |
UCSF ChimeraX |
[65] |
https://www.cgl.ucsf.edu/chimerax/ |
Curves+ |
[69] |
https://bisi.ibcp.fr/tools/curves_plus/ |
LAS-AF |
Leica Microsystems |
https://www.leica-microsystems.com |
Fiji (Fiji Is Just ImageJ) |
[50] |
https://imagej.net/Fiji |
CRaQ v1.12 |
[51] |
http://facilities.igc.gulbenkian.pt/microscopy/macros/CRaQ_v1.12.ijm |
Serial EM |
[55] |
http://bio3d.colorado.edu/SerialEM/ |
Find_XL |
[66] |
http://biolchem.huji.ac.il/nirka/software.html |
RStudio |
[70] |
http://www.rstudio.com/. |
Other |
HisTrap FF |
GE Healthcare |
11–0004-58 |
Amicon Ultra concentrators |
Millipore |
UFC501024 |
C18 stage-tips |
Thermo Fisher Scientific |
89870 |