Table 1.
PCR primers used in the RT-PCR protocol for astrocytes and pyramidal cells
Gene accession # | First PCR primers | Size (bp) | Second PCR nested primers | Size (bp) |
---|---|---|---|---|
GFAP | Sense, 454 AGCTCCAAGATGAAACCAACCTa | 631 | Sense, 509 ACAGACAGGAGGCGGATGAA | 263 |
NM_017009 | Antisense, 1066 CGATCTCGATGTCCAGGGCa | Antisense, 749 GGACCGATACCACTCTTCTGTTT | ||
S100β | Sense, 45 CATCAGTATTCAGGGAGAGAGGG | 166 | Sense, 58 GGGAGAGAGGGTGACAAGCA | 132 |
NM_013191.1 | Antisense, 191 GTCACACTCCCCATCCCCAT | Antisense, 170 TTCGTCCAGCGTCTCCATCA | ||
COX-1 | Sense, 27 GTTTCCCCTGCTGCTGCTC | 359 | Sense, 137 AGGGTGTCTGTGTCCGCTTC | 185 |
NM_017043.1 | Antisense, 366 GGCTGGGGATAAGGTTGGAC | Antisense, 301 GGCATTCACAAACTCCCAGAT | ||
COX-2 | Sense, 199 CTGAAGCCCACCCCAAACAC | 247 | Sense, 202 AAGCCCACCCCAAACACAGT | 206 |
NM_017232.2 | Antisense 426 TGGGAGTTGGGCAGTCATCA | Antisense, 384 CTGGTGTAGTAGGAGAGGTTGGAG | ||
VGluT1 | bSense, 361 GGCTCCTTTTTCTGGGGGTACb | 259 | Sense, 373 TGGGGGTACATTGTCACTCAGAb | 201 |
NM_053859.1 | Antisense, 600 CCAGCCGACTCCGTTCTAAGb | Antisense, 553 ATGGCAAGCAGGGTATGTGACb |