Table 5.
The list of genes identified as consistently differentially expressed between ‘spur’ class and ‘blade’ class tissue in this study and in Yant et al., (2015) and their protein family (Pfam) definitions
| Expressed higher in | Locus Name | Protein family (Pfam) definition |
|---|---|---|
| ‘spur’ class | Aqcoe1G044400 | PF01221 - Dynein light chain type 1 |
| Aqcoe1G166200 | PF13837 - Myb/SANT-like DNA-binding domain | |
| Aqcoe1G376900 | PF00067 - Cytochrome P450 | |
| Aqcoe1G211300 | PF00560 - Leucine Rich Repeat; PF13855 - Leucine rich repeat | |
| Aqcoe2G045800 | PF00447 - HSF-type DNA-binding | |
| Aqcoe2G300900 | PF06955 - Xyloglucan endo-transglycosylase (XET) C-terminus | |
| PF00722 - Glycosyl hydrolases family 16 | ||
| Aqcoe3G231100 | PF13912 - C2H2-type zinc finger | |
| Aqcoe7G080100 | PF01237 - Oxysterol-binding protein | |
| PF15413 - Pleckstrin homology domain | ||
| ‘blade’ class | Aqcoe1G171000 | NA |
| Aqcoe1G224200 | PF05097 - Protein of unknown function (DUF688) | |
| Aqcoe2G096600 | PF01699 - Sodium/calcium exchanger protein | |
| Aqcoe2G194000 | NA | |
| Aqcoe2G249500 | PF13202 - EF hand; PF07885 - Ion channel | |
| Aqcoe2G272700 | PF00582 - Universal stress protein family | |
| Aqcoe3G124200 | PF00295 - Glycosyl hydrolases family 28 | |
| Aqcoe3G392900 | PF00560 - Leucine Rich Repeat | |
| PF13855 - Leucine rich repeat | ||
| Aqcoe3G424300 | NA | |
| Aqcoe4G007000 | PF00083 - Sugar (and other) transporter | |
| Aqcoe4G086200 | PF00931 - NB-ARC domain | |
| Aqcoe4G229000 | PF00931 - NB-ARC domain | |
| Aqcoe5G014800 | PF00891 - O-methyltransferase | |
| PF08100 - Dimerisation domain | ||
| Aqcoe5G029700 | PF08263 - Leucine rich repeat N-terminal domain | |
| PF00069 - Protein kinase domain | ||
| PF00560 - Leucine Rich Repeat | ||
| PF13855 - Leucine rich repeat | ||
| Aqcoe5G126100 | PF00069 - Protein kinase domain | |
| Aqcoe5G143900 | NA | |
| Aqcoe5G325200 | PF09261 - Alpha mannosidase, middle domain | |
| PF01074 - Glycosyl hydrolases family 38 N-terminal domain | ||
| PF07748 - Glycosyl hydrolases family 38 C-terminal domain | ||
| Aqcoe5G408100 | PF00201 - UDP-glucoronosyl and UDP-glucosyl transferase | |
| Aqcoe5G474100 | PF04844 - Transcriptional repressor, ovate | |
| Aqcoe6G001700 | PF02365 - No apical meristem (NAM) protein family | |
| Aqcoe6G025500 | PF00171 - Aldehyde dehydrogenase family | |
| Aqcoe6G122000 | PF00010 - Helix-loop-helix DNA-binding domain | |
| Aqcoe7G007800 | PF00612 - IQ calmodulin-binding motif | |
| PF13178 - Protein of unknown function (DUF4005) | ||
| Aqcoe7G015100 | PF00201 - UDP-glucoronosyl and UDP-glucosyl transferase | |
| Aqcoe7G086200 | PF04784 - Protein of unknown function, DUF547 | |
| PF14389 - Leucine-zipper of ternary complex factor MIP1 | ||
| Aqcoe7G318900 | PF07714 - Protein tyrosine kinase | |
| Aqcoe7G355800 | PF00450 - Serine carboxypeptidase |