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. 2019 Aug 22;14(8):e0221040. doi: 10.1371/journal.pone.0221040

Table 4. The most abundant SSR repeat types in the transcriptome.

Mononucleotide Dinucleotide Trinucleotide Tetranucleotide
A/T (52.21%) AG/CT (14.73%) AAG/CTT (2.58%) ACAT/ATGT (0.45%)
C/G (1.69%) AT/AT (9.80%) ATC/ATG (2.06%) AAAT/ATTT (0.20%)
AC/GT (7.99%) AAT/ATT (1.92%) AGAT/ATCT (0.10%)
CG/CG (0.03%) AGC/CTG (1.66%) AAAG/CTTT (0.07%)
ACC/GGT (1.13%) AGGG/CCCT (0.07%)
AGG/CCT (1.13%) AAAC/GTTT (0.06%)
AAC/GTT (0.59%) AGCT/AGCT (0.05%)
ACT/AGT (0.56%) AACC/GGTT (0.04%)
ACG/CGT (0.18%) ACAG/CTGT (0.03%)
CCG/CGG (0.13%) ACTC/AGTG (0.03%)
AGGC/CCTG (0.03%)