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. 2019 Aug 22;20:437. doi: 10.1186/s12859-019-3028-6

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 5 — Results of connectivity score analysis with a fixed number of 15 genes with lowest FDR. a, Boxplot of the ranks of the same drug in connectivity mapping between CMAP and LINCS dataset. b, The proportion of drugs having the same drug ranked within top 3 in connectivity mapping between shared genes of CMAP and LINCS dataset. The x-axes are grouped by the total sample size in CMAP dataset. The colors indicate the differential gene expression analysis methods