Table 1. CyTargetLinker API.

List of the API methods of CyTargetLinker, their parameters and a general description.

API Method	Parameters	Task
version		Returns the version of the CyTargetLinker app
extend	direction, idAttribute, linkSetDirectory, linkSetFiles, network	Extend network with interactions from linksets
applyVisualstyle	network	Apply the CyTargetLinker visual style to the extended network
applyLayout	network	Apply a force-directed layout
filterOverlap	network, overlap	Filter extension and show only links supported by n linksets
showPanel	show	Show the CyTargetLinker result panel