Figure 5.

Measures of relatedness: parasite pairs with unknown relatedness. Half-violin plots showing distributions of ${\widehat{\mathrm{IBS}}}_m$ (top) and ${\widehat{r}}_m$ (bottom), based on pairwise comparisons of Plasmodium monoclonal samples from six published P. falciparum biallelic SNP data sets (Table 1) and a single P. vivax MS data set (Thailand MS). Black vertical bars denote ${\overline{h}}_{m_{\max }}$ (top), and triangles denote the mean ${\widehat{\mathrm{IBS}}}_m$ (top) and mean ${\widehat{r}}_m$ (bottom). IBS, identity-by-state; MS, microsatellite; WGS, whole-genome sequencing.