Table 1. The running time (seconds) for map construction in the real datasets.
Population | #founders | #offspring | #markers | #groups | missing f | magicMap |
---|---|---|---|---|---|---|
Arabidopsis RIL | 2 | 148 | 846 | 5 | 0.006 | 572a |
Apple CP | 2 | 87 | 1,903 | 17 | 0.050 | 1,508b |
Arabidopsis MAGIC | 19 | 703 | 1,228 | 5 | 0.020 | 8,339 |
Barley MAGIC | 5 | 916 | 357 | 7 | 0.015 | 2,355 |
Tomato MAGIC | 8 | 238 | 1,482 | 12 | 0.052 | 2,551 |
Maize MAGIC | 8 | 303 | 41,473 | 10 | 0.081 | 243,532 |
Maize US-NAM | 26 | 4699 | 1,144 | 10 | 0.078 | 47,723 |
Maize EU-NAM | 11 | 841 | 34,223 | 10 | 0.021 | 308,352 |
25 sec for MSTmap.
253 sec for Lep-MAP3.