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. Author manuscript; available in PMC: 2019 Aug 23.
Published in final edited form as: Cell Rep. 2019 Aug 13;28(7):1935–1947.e5. doi: 10.1016/j.celrep.2019.07.037

KEY RESOURCES TABLE.

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Anti-Biotin Thermo Cat#31952; RRID:AB_2096845
Anti-Map2 Millipore Cat#MAB3418; RRID:AB_94856
Anti-NeuN Millipore Cat#MAB377: RRID: AB_2298772
Anti-Alix Millipore Cat#ABC40; RRID: AB_10806218
Anti-Synaptotagmin Millipore Cat#MAB5200; RRID:AB_2255625
Anti-Tau1 (monoclonal TAU46) Sigma Cat#T9450; RRID:AB_477595
Anti-mTOR (monoclonal 7C10) Cell Signaling Cat#2983P; RRID:AB_2105622
Anti-GFAP Dako Cat#GA52461–2; RRID:AB_10013382
Anti-GAPDH (monoclonal GAPDH-71.1) Sigma Cat#G8795; RRID:AB_1078991
Anti-Munc18 (rabbit) Sigma Cat#M2694; RRID:AB_477176
ABC-HRP (Vectastain, elite) Vector labs Cat#LS-J1001–1
Anti-Ras (monoclonal EP1125Y) Abcam Cat#AB52939; RRID:AB_2121042
KIF5A Abcam Cat#AB118535
CAMKII (monoclonal 6G9) Novus Cat#NB100–1983; RRID:AB_10001339
PSMD2 Cell Signaling Cat#1414S; RRID:AB_2797135
Secondary Anti-Mouse Ig conjugated with HRP Bio-Rad Cat#172–1011; RRID:AB_11125936
Secondary Anti-rabbit Ig conjugated with HRP Bio-Rad Cat#172–1019; RRID:AB_11125143
Secondary Anti-goat Ig conjugated with HRP Bio-Rad Cat#172–1034; RRID:AB_11125144
Secondary Anti-mouse Ig conjugated with Alexa568 Life technologies Cat#A11004; RRID: AB_2534072
Secondary anti-goat Ig conjugated with Alexa 488 Life technologies Cat#A11055; RRID:AB_2534102
Secondary anti-rabbit Ig conjugated with Alexa 568 Life technologies CathA10042; RRID:AB_2534017
STREPTAVIDIN ALEXA488 (NANOFLUOROGOLD) Nanoprobes Cat#7216–0.5ML; RRID:AB_2315780
STREPTAVIDIN ALEXA488 Life technologies Cat#S11223; RRID:AB_2315383
Biological Samples
Healthy Rat fixed brain and optic nerve tissue. Envigo (Harlan) N/A
Healthy Rat dissected retinas, Optic nerve, LGN, SC and frontal cortex Envigo (Harlan) N/A
Chemicals, Peptides, and Recombinant Proteins
EZ-Link NHS-biotin Thermo Cat#20217
Critical Commercial Assays
Fluorescence biotin quantitation kit Thermo Cat#46610
TSA Biotin system Perkin Elmer Cat#NEL700A001KT
ABC-HRP (Vectastain, elite) Vector labs Cat#LS-J1001–1
Goldenhance EM Nanoprobes Cat#2113
Experimental Models: Organisms/Strains
Rattus novegicus Strain (Sprague Dawley SD) Envigo (Harlam) IACUC protocol 08–0082
Software and Algorithms
ImageJ Schneider et al., 2012 https://imagej.nih.gov/ij/